Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.65□□□□□ -2.15
CHRNA9Q9UGM1 CYP4A27P-201ENST00000567218 190 ntBASIC1.65□□□□□ -2.15
CHRNA9Q9UGM1 AC010928.2-201ENST00000588017 287 ntBASIC1.65□□□□□ -2.15
CHRNA9Q9UGM1 AC064807.4-201ENST00000607201 407 ntBASIC1.65□□□□□ -2.15
CHRNA9Q9UGM1 AC008147.4-201ENST00000617570 1204 ntBASIC1.65□□□□□ -2.15
CHRNA9Q9UGM1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
CHRNA9Q9UGM1 RNA5SP100-201ENST00000410903 110 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 RNA5SP59-201ENST00000410922 110 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AP000275.1-201ENST00000411943 390 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AC003989.2-201ENST00000440224 169 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 RNU6-430P-201ENST00000517078 107 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 SUB1P4-201ENST00000566062 339 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AC025449.1-201ENST00000603896 529 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AP001836.1-201ENST00000604675 523 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.64□□□□□ -2.15
CHRNA9Q9UGM1 RNU6-428P-201ENST00000362942 107 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 Y_RNA.169-201ENST00000363745 96 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 VN1R108P-201ENST00000431580 830 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC007547.1-201ENST00000462177 490 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 SNORD60.2-201ENST00000516883 86 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC107304.1-201ENST00000604229 296 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC002044.1-201ENST00000606707 158 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC104073.3-201ENST00000610942 955 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AL359697.1-201ENST00000624879 587 ntBASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.63□□□□□ -2.15
CHRNA9Q9UGM1 MTND5P9-201ENST00000503854 1755 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 RNU6-552P-201ENST00000362869 119 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 MTCO3P41-201ENST00000414801 328 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 MTCO3P38-201ENST00000468910 766 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 FAM206BP-201ENST00000510179 541 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 AC040904.1-201ENST00000590850 223 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 AC121247.2-201ENST00000604776 136 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 AC008536.2-201ENST00000607284 349 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.62□□□□□ -2.15
CHRNA9Q9UGM1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 SNORD31B-201ENST00000364977 69 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 RNU6-827P-201ENST00000365553 106 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 RNU6-438P-201ENST00000365561 103 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 U8.13-201ENST00000390842 128 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 CDK8P2-201ENST00000415020 547 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 MTCO1P21-201ENST00000416634 589 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 MTCO1P44-201ENST00000441935 243 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 RNU7-63P-201ENST00000459054 62 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 snoU13.15-201ENST00000459407 104 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 RPS29P11-201ENST00000496507 171 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 AL356057.1-201ENST00000533798 831 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 AP000873.5-201ENST00000533906 236 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 AC109446.1-201ENST00000566172 220 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.61□□□□□ -2.15
CHRNA9Q9UGM1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 RNU6-82P-201ENST00000363970 107 ntBASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 FTH1P12-201ENST00000432137 551 ntBASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 RPL7P54-201ENST00000438336 674 ntBASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 AL031274.1-201ENST00000450334 232 ntBASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.6□□□□□ -2.15
CHRNA9Q9UGM1 RNU7-138P-201ENST00000459479 64 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms