Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Y_RNA.402-201ENST00000383972 102 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 Y_RNA.450-201ENST00000384198 113 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 CYCSP48-201ENST00000417124 323 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AL591806.2-201ENST00000433122 173 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 MTND1P34-201ENST00000438556 671 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF41Q9H4P4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AF213884.2-201ENST00000510417 903 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 RNU6-548P-201ENST00000517083 115 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 CBX3P7-201ENST00000532876 502 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 MIR3683-201ENST00000580847 82 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 MIR5692C1-201ENST00000585309 91 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AC104984.5-201ENST00000586878 94 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 BNIP3P25-201ENST00000596023 559 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AC092747.3-201ENST00000603769 301 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AC012557.2-201ENST00000605919 418 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 Z82243.1-201ENST00000609432 473 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 DISC2.1-201ENST00000612827 205 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 MIR6715A-201ENST00000615929 79 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 U4.5-201ENST00000617137 123 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 AC024614.3-201ENST00000637860 256 ntBASIC2.03□□□□□ -2.08
RNF41Q9H4P4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RNF41Q9H4P4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
RNF41Q9H4P4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 RNU6-527P-201ENST00000363425 104 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 RNU6-827P-201ENST00000365553 106 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 SNORD37.1-201ENST00000390968 65 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AL627390.1-201ENST00000396055 340 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC138623.1-201ENST00000418060 216 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 CYCSP49-201ENST00000420810 319 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AL591043.1-201ENST00000432461 424 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 snoU13.23-201ENST00000458863 104 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 RPL30P12-201ENST00000474666 353 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AL121594.1-201ENST00000475906 575 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 RPS29P25-201ENST00000481709 171 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC140059.1-201ENST00000489238 361 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC011352.1-201ENST00000512300 793 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 RNU2-53P-201ENST00000516257 147 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 SNORA25.15-201ENST00000516487 89 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC069113.1-201ENST00000517763 267 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AP005902.1-201ENST00000521358 186 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AP005597.4-201ENST00000526762 229 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC109635.3-201ENST00000529536 185 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC103996.1-201ENST00000555468 102 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC104581.2-201ENST00000572227 430 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 VN1R107P-201ENST00000601784 209 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC068790.6-201ENST00000602558 258 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC073410.2-201ENST00000603240 332 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AL138963.2-201ENST00000605137 226 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 MIR502-201ENST00000606349 86 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AL121757.2-201ENST00000611223 313 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 RMST_3.1-201ENST00000611651 109 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 AC012640.5-201ENST00000623897 319 ntBASIC2.02□□□□□ -2.09
RNF41Q9H4P4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RNF41Q9H4P4 Y_RNA.9-201ENST00000362354 101 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 RNU6-692P-201ENST00000384496 107 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 MIR544A-201ENST00000384855 91 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 SNORD73A-201ENST00000386062 65 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 MIR548F1-201ENST00000408667 84 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 Y_RNA.615-201ENST00000410769 117 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 RNU6-293P-201ENST00000411259 106 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 USP9YP18-201ENST00000425912 695 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 ERLEC1P1-201ENST00000433806 578 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.01□□□□□ -2.09
RNF41Q9H4P4 RNU7-138P-201ENST00000459479 64 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.01□□□□□ -2.09
RNF41Q9H4P4 MTND1P5-201ENST00000517906 940 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.01□□□□□ -2.09
RNF41Q9H4P4 PSMA3P-201ENST00000555485 635 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AL133241.1-201ENST00000556832 487 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 ANP32BP3-201ENST00000559213 706 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 BNIP3P16-201ENST00000589779 534 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 RPL30P11-203ENST00000598995 310 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AC004492.1-201ENST00000607036 742 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 FAM157A-202ENST00000615155 405 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AC098679.4-201ENST00000624241 654 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AC131280.1-202ENST00000624067 4211 ntBASIC2.01□□□□□ -2.09
RNF41Q9H4P4 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 Y_RNA.6-201ENST00000362350 114 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 SNORD32A-201ENST00000364805 84 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 RNU6-1032P-201ENST00000384100 107 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 ARL5AP1-201ENST00000418991 388 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms