Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP301-201ENST00000362537 121 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORA70H-201ENST00000383910 135 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORA70J-201ENST00000384182 135 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP53-201ENST00000391299 120 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 AL359511.1-201ENST00000402970 211 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 POU5F1P5-201ENST00000445059 658 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORA35.1-201ENST00000458908 128 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 RN7SL223P-201ENST00000470401 294 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORA25.16-201ENST00000516741 121 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU6-894P-201ENST00000517094 105 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 AC073916.1-201ENST00000545095 130 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 CYCSP30-201ENST00000546447 172 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR548X-201ENST00000580069 75 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 AC004241.2-201ENST00000614562 444 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 AC068870.2-201ENST00000620635 389 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 AC022513.1-201ENST00000624512 117 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRTAP3-3Q9BYR6 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP51-201ENST00000364750 119 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR203A-201ENST00000384836 110 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR7-2-201ENST00000384970 110 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORD113-2-201ENST00000391082 72 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 AC011753.1-201ENST00000451001 220 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 SNRPCP3-201ENST00000474888 476 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 RN7SL647P-201ENST00000485429 300 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 IGLC4-201ENST00000517690 248 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 HMGB1P40-201ENST00000525121 540 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 AL031777.2-201ENST00000611953 196 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 AC008626.2-201ENST00000624425 248 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 AC107068.1-201ENST00000563286 4218 ntBASIC3.24□□□□□ -1.89
KRTAP3-3Q9BYR6 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 LRRC37A9P-201ENST00000603850 5376 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORD8-201ENST00000363915 110 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORA30B-201ENST00000365319 129 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 SNORA70.9-201ENST00000384370 135 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR630-201ENST00000384957 97 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms