Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAIPQ9BWF2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TRAIPQ9BWF2 MTND5P35-201ENST00000557537 1720 ntBASIC4.18□□□□□ -1.74
TRAIPQ9BWF2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 MAPK10-373ENST00000641983 6772 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 RNU6-318P-201ENST00000384283 103 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 Y_RNA.574-201ENST00000384766 95 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 MIR329-1-201ENST00000385028 80 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 SNORA12-201ENST00000391162 147 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 MIR548F4-201ENST00000408515 105 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 RHEBP3-201ENST00000411920 351 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 BX679664.1-201ENST00000434429 253 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 AL161788.1-201ENST00000441805 169 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 UQCRBP2-201ENST00000447827 297 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 PCNPP5-201ENST00000452246 481 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 RPS23P5-201ENST00000495419 428 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 AC083906.5-201ENST00000503722 328 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 AC067942.3-201ENST00000512025 362 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 RNU5F-4P-201ENST00000516581 114 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 AP000942.4-201ENST00000604811 241 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 AC010205.1-201ENST00000616668 449 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 7SK.10-201ENST00000621414 298 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 AC130454.1-201ENST00000622948 401 ntBASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAIPQ9BWF2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 Y_RNA.183-201ENST00000363882 113 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 RNU6-26P-201ENST00000383985 107 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 RNU6-611P-201ENST00000384276 104 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 RNU6-1109P-201ENST00000391187 107 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 AL139247.1-201ENST00000422768 325 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 RNU6-897P-201ENST00000517135 105 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 MIR3186-201ENST00000577404 85 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 MIR3117-201ENST00000584034 78 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 AL356280.1-201ENST00000603614 379 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 RAC1P9-201ENST00000604990 392 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 U6.104-201ENST00000637979 90 ntBASIC4.16□□□□□ -1.74
TRAIPQ9BWF2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRAIPQ9BWF2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 RNU6-770P-201ENST00000363929 105 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 RNU6-1145P-201ENST00000384246 107 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 RNU6-1274P-201ENST00000384557 107 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 AL033519.2-201ENST00000403958 392 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 MRPL35P1-201ENST00000404272 572 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 MTCYBP9-201ENST00000431021 303 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 RBMY2UP-201ENST00000453474 324 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 AC090515.1-201ENST00000465295 476 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 AC009093.8-201ENST00000641769 292 ntBASIC4.15□□□□□ -1.75
TRAIPQ9BWF2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 RNU6-461P-201ENST00000364195 107 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 RNU6-463P-201ENST00000384340 107 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 MIR627-201ENST00000384979 97 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 YME1L1P1-201ENST00000429435 297 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 EEF1B2P7-201ENST00000451177 676 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 MIR3944-201ENST00000581277 108 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 SNORD11B-201ENST00000607707 90 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 AL034408.1-202ENST00000636088 415 ntBASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAIPQ9BWF2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 RNU6-1026P-201ENST00000384465 108 ntBASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 MIR7-3-201ENST00000384898 110 ntBASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 AL731563.1-201ENST00000442202 214 ntBASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 Z96811.1-201ENST00000445880 108 ntBASIC4.13□□□□□ -1.75
TRAIPQ9BWF2 AC009237.7-201ENST00000447357 229 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms