Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC012314.7-201ENST00000619693 93 ntBASIC4.71□□□□□ -1.66
PHOX2BQ99453 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.71□□□□□ -1.66
PHOX2BQ99453 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.71□□□□□ -1.66
PHOX2BQ99453 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHOX2BQ99453 AL133412.1-201ENST00000380194 2992 ntBASIC4.71□□□□□ -1.66
PHOX2BQ99453 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PHOX2BQ99453 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHOX2BQ99453 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PHOX2BQ99453 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 SCN1A-220ENST00000641603 12506 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PHOX2BQ99453 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHOX2BQ99453 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PHOX2BQ99453 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 RNA5SP307-201ENST00000362863 116 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 SNORA22-201ENST00000383907 134 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 Y_RNA.432-201ENST00000384087 111 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 MIR659-201ENST00000384963 97 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 AL121890.1-201ENST00000435457 205 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 HMGN2P9-201ENST00000476875 229 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 RN7SL810P-201ENST00000493031 276 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 RPL23AP54-201ENST00000495129 419 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 PARP4P3-201ENST00000510265 317 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 AC010598.1-201ENST00000510378 103 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 AC105129.1-201ENST00000560250 297 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 MIR6867-201ENST00000610636 67 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.7□□□□□ -1.66
PHOX2BQ99453 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.7□□□□□ -1.66
PHOX2BQ99453 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHOX2BQ99453 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 OR14L1P-202ENST00000641545 3009 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 snoU2_19.1-201ENST00000362361 80 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 SNORA27.1-201ENST00000362604 124 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 RNU6-1082P-201ENST00000364574 107 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 SNORD18B-201ENST00000365659 72 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 MIR218-2-201ENST00000385006 110 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 RNU1-82P-201ENST00000390851 165 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 MIR1278-201ENST00000408753 81 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 Z92545.1-201ENST00000411782 234 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 AL645608.4-201ENST00000423619 154 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 RPS26P55-201ENST00000471178 356 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 PPIAP15-201ENST00000479662 484 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 RPL23AP94-201ENST00000512518 302 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 MIR3613-201ENST00000579844 87 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 MIR4753-201ENST00000585119 83 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 AC008739.2-201ENST00000597006 317 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 FAM27D1-201ENST00000612308 341 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 AC112484.5-201ENST00000624189 228 ntBASIC4.69□□□□□ -1.66
PHOX2BQ99453 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHOX2BQ99453 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PHOX2BQ99453 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHOX2BQ99453 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHOX2BQ99453 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHOX2BQ99453 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PHOX2BQ99453 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.68□□□□□ -1.66
PHOX2BQ99453 SNORA20B-201ENST00000384220 132 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 Y_RNA.587-201ENST00000391210 103 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.68□□□□□ -1.66
PHOX2BQ99453 AL133547.1-201ENST00000448546 220 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 AC023449.1-201ENST00000454464 154 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 AC112771.1-201ENST00000463581 102 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 RNU6-772P-201ENST00000516042 105 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 AC015813.4-201ENST00000610469 179 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 MIR8069-1-201ENST00000616627 86 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 AL138721.1-201ENST00000616756 179 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 MIR8069-2-201ENST00000621412 86 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 AC140479.6-201ENST00000633535 357 ntBASIC4.68□□□□□ -1.66
PHOX2BQ99453 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PHOX2BQ99453 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.68□□□□□ -1.66
PHOX2BQ99453 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.68□□□□□ -1.66
PHOX2BQ99453 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.68□□□□□ -1.66
PHOX2BQ99453 AL391516.1-201ENST00000554380 2449 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PHOX2BQ99453 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.67□□□□□ -1.66
PHOX2BQ99453 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHOX2BQ99453 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHOX2BQ99453 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PHOX2BQ99453 MIR383-201ENST00000362257 73 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 RNU6-235P-201ENST00000362644 107 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 RNU6-1255P-201ENST00000363434 112 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 RNU1-132P-201ENST00000364300 164 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 RNU4-41P-201ENST00000364426 143 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 SNORD32B-201ENST00000364460 84 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 RNA5SP513-201ENST00000364648 118 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 SNORA73.2-201ENST00000364946 201 ntBASIC4.67□□□□□ -1.66
PHOX2BQ99453 RNU6-136P-201ENST00000384663 107 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms