Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNU6-136P-201ENST00000384663 107 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 MIR1289-1-201ENST00000408836 144 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 RNA5SP225-201ENST00000410874 135 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 RNA5SP31-201ENST00000411144 127 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 RPS26P42-201ENST00000413485 326 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 Z85995.1-201ENST00000415547 335 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AC008065.1-201ENST00000428525 348 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AL445687.1-201ENST00000439946 251 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 RPS26P2-201ENST00000440331 348 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AC016632.1-201ENST00000503994 196 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AC091178.1-203ENST00000584586 279 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RSPO4Q2I0M5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.96□□□□□ -1.77
RSPO4Q2I0M5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.96□□□□□ -1.77
RSPO4Q2I0M5 PCAT14-202ENST00000627127 3935 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 RNU6-727P-201ENST00000363592 107 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SNORD115-30-201ENST00000364117 82 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 RNU1-140P-201ENST00000365040 165 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 Y_RNA.341-201ENST00000365341 102 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SNORD18B-201ENST00000365659 72 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 RNU1-63P-201ENST00000383902 164 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 Y_RNA.456-201ENST00000384232 111 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 Y_RNA.544-201ENST00000384650 113 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SNORD12C-201ENST00000386307 89 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 RNU6-440P-201ENST00000390882 105 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SNORA79-201ENST00000408376 140 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SNORA3.3-201ENST00000408712 125 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 RNU6-855P-201ENST00000410395 104 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 Y_RNA.622-201ENST00000411091 108 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SNRPGP7-201ENST00000469016 106 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 RNA5SP446-201ENST00000515955 82 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 AC131055.1-201ENST00000584626 316 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 MIR6868-201ENST00000611215 58 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO4Q2I0M5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 Y_RNA.310-201ENST00000365063 113 ntBASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 AL590399.6-201ENST00000446396 307 ntBASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 RN7SL601P-201ENST00000471221 293 ntBASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 RNU6-521P-201ENST00000516663 105 ntBASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 AC021231.3-201ENST00000558497 370 ntBASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RSPO4Q2I0M5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 MIR494-201ENST00000349529 81 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 RNA5SP432-201ENST00000362480 116 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 RNU6-228P-201ENST00000362700 106 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 Y_RNA.221-201ENST00000364248 96 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 RNU6-309P-201ENST00000364573 106 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 Y_RNA.510-201ENST00000384511 114 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 RNU6-383P-201ENST00000410864 94 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 AC006011.1-201ENST00000442758 349 ntBASIC3.94□□□□□ -1.78
RSPO4Q2I0M5 SNRPGP8-201ENST00000454064 226 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms