Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL512633.1-201ENST00000399931 655 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RNU6-257P-201ENST00000410238 98 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 ELOCP21-201ENST00000412558 336 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RPL21P66-201ENST00000426566 466 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX4Q06945 NDUFB4P6-201ENST00000436819 366 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 AL353748.1-201ENST00000440753 474 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RPL30P12-201ENST00000474666 353 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.96□□□□□ -1.78
SOX4Q06945 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.96□□□□□ -1.78
SOX4Q06945 RN7SKP18-201ENST00000516005 275 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 RNA5SP272-201ENST00000516095 111 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX4Q06945 MIR3684-201ENST00000579779 74 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 AL451007.1-201ENST00000595491 289 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SOX4Q06945 Y_RNA.778-201ENST00000620203 90 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 AC099654.7-201ENST00000635788 2127 ntBASIC3.96□□□□□ -1.78
SOX4Q06945 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SOX4Q06945 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SOX4Q06945 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX4Q06945 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SOX4Q06945 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX4Q06945 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SOX4Q06945 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX4Q06945 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SOX4Q06945 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SOX4Q06945 SNORA7.2-201ENST00000364446 145 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 RNU6-793P-201ENST00000384233 104 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SOX4Q06945 MIR888-201ENST00000401186 77 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 RNU2-54P-201ENST00000410299 190 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 RPS29P4-201ENST00000414733 161 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 NDUFB1P1-201ENST00000435191 180 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 RPL39P29-201ENST00000447779 157 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 AC010409.1-201ENST00000487382 476 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 SNORA70.18-201ENST00000516696 98 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 CKS1BP7-201ENST00000522230 235 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 AC009163.5-201ENST00000575421 637 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 AC025946.2-201ENST00000603398 234 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX4Q06945 AP000553.6-201ENST00000641242 118 ntBASIC3.95□□□□□ -1.78
SOX4Q06945 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX4Q06945 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX4Q06945 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX4Q06945 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX4Q06945 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SOX4Q06945 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX4Q06945 AC073073.2-201ENST00000609827 2578 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 SNORA63.1-201ENST00000362493 131 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 SNORA70.4-201ENST00000365509 134 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 MIR569-201ENST00000385228 96 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 MIR549A-201ENST00000385268 96 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 SNORA26.3-201ENST00000391119 136 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 AC008267.6-201ENST00000441664 139 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 Y_RNA.637-201ENST00000459424 114 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 snoU13.22-201ENST00000459428 104 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 AC091179.3-201ENST00000474761 144 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 RNU6-581P-201ENST00000516214 105 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX4Q06945 TGIF1P1-201ENST00000558095 802 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX4Q06945 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SOX4Q06945 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.94□□□□□ -1.78
SOX4Q06945 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX4Q06945 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX4Q06945 AC022336.2-201ENST00000568966 2538 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SOX4Q06945 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 SNORD20-201ENST00000384550 80 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 NDUFS5P4-201ENST00000412983 318 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 AC009963.1-201ENST00000417265 157 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 DBIP2-201ENST00000419076 262 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX4Q06945 AC012308.1-201ENST00000451232 178 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX4Q06945 AC007215.1-201ENST00000464893 276 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX4Q06945 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX4Q06945 uc_338.32-201ENST00000615087 172 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 MIR3529-201ENST00000637713 78 ntBASIC3.93□□□□□ -1.78
SOX4Q06945 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX4Q06945 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX4Q06945 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX4Q06945 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SOX4Q06945 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SOX4Q06945 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SOX4Q06945 MIR183-201ENST00000384958 110 ntBASIC3.92□□□□□ -1.78
SOX4Q06945 RNU6-239P-201ENST00000390990 99 ntBASIC3.92□□□□□ -1.78
SOX4Q06945 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms