Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
VCPP55072 Y_RNA.41-201ENST00000362646 102 ntBASIC2.07□□□□□ -2.08
VCPP55072 SNORA69-201ENST00000383895 132 ntBASIC2.07□□□□□ -2.08
VCPP55072 RNA5SP390-201ENST00000410191 113 ntBASIC2.07□□□□□ -2.08
VCPP55072 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.07□□□□□ -2.08
VCPP55072 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.07□□□□□ -2.08
VCPP55072 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VCPP55072 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.07□□□□□ -2.08
VCPP55072 TIMM9P3-201ENST00000428659 274 ntBASIC2.07□□□□□ -2.08
VCPP55072 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.07□□□□□ -2.08
VCPP55072 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.07□□□□□ -2.08
VCPP55072 RNU6-261P-201ENST00000459506 102 ntBASIC2.07□□□□□ -2.08
VCPP55072 AC104564.1-201ENST00000493028 407 ntBASIC2.07□□□□□ -2.08
VCPP55072 RNA5SP137-201ENST00000516833 135 ntBASIC2.07□□□□□ -2.08
VCPP55072 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VCPP55072 AC109329.1-201ENST00000518744 317 ntBASIC2.07□□□□□ -2.08
VCPP55072 AC023050.3-201ENST00000541142 333 ntBASIC2.07□□□□□ -2.08
VCPP55072 AC233702.2-202ENST00000562547 291 ntBASIC2.07□□□□□ -2.08
VCPP55072 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.07□□□□□ -2.08
VCPP55072 AC090897.2-201ENST00000581715 130 ntBASIC2.07□□□□□ -2.08
VCPP55072 MIR3941-201ENST00000582572 103 ntBASIC2.07□□□□□ -2.08
VCPP55072 MIR4424-201ENST00000585257 86 ntBASIC2.07□□□□□ -2.08
VCPP55072 AC073410.2-201ENST00000603240 332 ntBASIC2.07□□□□□ -2.08
VCPP55072 Z82243.1-201ENST00000609432 473 ntBASIC2.07□□□□□ -2.08
VCPP55072 U2.17-201ENST00000611454 95 ntBASIC2.07□□□□□ -2.08
VCPP55072 AC015540.1-201ENST00000615828 501 ntBASIC2.07□□□□□ -2.08
VCPP55072 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
VCPP55072 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VCPP55072 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VCPP55072 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
VCPP55072 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VCPP55072 RNU6-266P-201ENST00000364225 107 ntBASIC2.06□□□□□ -2.08
VCPP55072 RNU1-57P-201ENST00000384491 166 ntBASIC2.06□□□□□ -2.08
VCPP55072 HMGN2P39-201ENST00000398005 273 ntBASIC2.06□□□□□ -2.08
VCPP55072 AL512604.1-201ENST00000404812 257 ntBASIC2.06□□□□□ -2.08
VCPP55072 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.06□□□□□ -2.08
VCPP55072 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.06□□□□□ -2.08
VCPP55072 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.06□□□□□ -2.08
VCPP55072 AC117503.1-201ENST00000472241 394 ntBASIC2.06□□□□□ -2.08
VCPP55072 CCDC34P1-201ENST00000507441 517 ntBASIC2.06□□□□□ -2.08
VCPP55072 AC009646.1-201ENST00000510455 318 ntBASIC2.06□□□□□ -2.08
VCPP55072 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
VCPP55072 PSMA3P-201ENST00000555485 635 ntBASIC2.06□□□□□ -2.08
VCPP55072 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
VCPP55072 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
VCPP55072 AL031274.2-201ENST00000599419 203 ntBASIC2.06□□□□□ -2.08
VCPP55072 AL109918.3-201ENST00000603072 338 ntBASIC2.06□□□□□ -2.08
VCPP55072 AC123912.5-201ENST00000605470 343 ntBASIC2.06□□□□□ -2.08
VCPP55072 HULC.1-201ENST00000612720 240 ntBASIC2.06□□□□□ -2.08
VCPP55072 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VCPP55072 uc_338.15-201ENST00000615470 191 ntBASIC2.06□□□□□ -2.08
VCPP55072 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
VCPP55072 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.06□□□□□ -2.08
VCPP55072 ZNF702P-202ENST00000434269 1966 ntBASIC2.06□□□□□ -2.08
VCPP55072 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VCPP55072 RNU6-529P-201ENST00000363383 104 ntBASIC2.05□□□□□ -2.08
VCPP55072 RNU6-527P-201ENST00000363425 104 ntBASIC2.05□□□□□ -2.08
VCPP55072 U3.13-201ENST00000364804 214 ntBASIC2.05□□□□□ -2.08
VCPP55072 RNY1P14-201ENST00000384426 108 ntBASIC2.05□□□□□ -2.08
VCPP55072 MIR186-201ENST00000384988 86 ntBASIC2.05□□□□□ -2.08
VCPP55072 SNORD37.1-201ENST00000390968 65 ntBASIC2.05□□□□□ -2.08
VCPP55072 SNORD56-201ENST00000413522 71 ntBASIC2.05□□□□□ -2.08
VCPP55072 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.05□□□□□ -2.08
VCPP55072 AC096920.1-201ENST00000423991 241 ntBASIC2.05□□□□□ -2.08
VCPP55072 AC008267.5-201ENST00000424928 265 ntBASIC2.05□□□□□ -2.08
VCPP55072 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.05□□□□□ -2.08
VCPP55072 AL589823.1-201ENST00000429577 183 ntBASIC2.05□□□□□ -2.08
VCPP55072 AL591043.1-201ENST00000432461 424 ntBASIC2.05□□□□□ -2.08
VCPP55072 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.05□□□□□ -2.08
VCPP55072 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
VCPP55072 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.05□□□□□ -2.08
VCPP55072 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.05□□□□□ -2.08
VCPP55072 RNA5SP401-201ENST00000515920 127 ntBASIC2.05□□□□□ -2.08
VCPP55072 RNU6-377P-201ENST00000515965 102 ntBASIC2.05□□□□□ -2.08
VCPP55072 SNORA25.15-201ENST00000516487 89 ntBASIC2.05□□□□□ -2.08
VCPP55072 Y_RNA.693-201ENST00000516641 110 ntBASIC2.05□□□□□ -2.08
VCPP55072 RNA5SP480-201ENST00000516840 109 ntBASIC2.05□□□□□ -2.08
VCPP55072 RNU6-835P-201ENST00000516974 104 ntBASIC2.05□□□□□ -2.08
VCPP55072 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.05□□□□□ -2.08
VCPP55072 AC022880.1-201ENST00000534017 973 ntBASIC2.05□□□□□ -2.08
VCPP55072 AL512360.1-201ENST00000555346 234 ntBASIC2.05□□□□□ -2.08
VCPP55072 DUXAP9-208ENST00000622815 614 ntBASIC2.05□□□□□ -2.08
VCPP55072 AC099654.12-201ENST00000639868 649 ntBASIC2.05□□□□□ -2.08
VCPP55072 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
VCPP55072 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
VCPP55072 SNORA25B-201ENST00000365507 128 ntBASIC2.04□□□□□ -2.08
VCPP55072 MIR95-201ENST00000385072 81 ntBASIC2.04□□□□□ -2.08
VCPP55072 MIR561-201ENST00000385216 97 ntBASIC2.04□□□□□ -2.08
VCPP55072 MIR1276-201ENST00000408707 83 ntBASIC2.04□□□□□ -2.08
VCPP55072 RNU2-23P-201ENST00000410545 195 ntBASIC2.04□□□□□ -2.08
VCPP55072 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.04□□□□□ -2.08
VCPP55072 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.04□□□□□ -2.08
VCPP55072 AL121601.2-201ENST00000438019 707 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC007969.2-201ENST00000441891 191 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.04□□□□□ -2.08
VCPP55072 MTCO3P38-201ENST00000468910 766 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC019235.1-201ENST00000503847 207 ntBASIC2.04□□□□□ -2.08
VCPP55072 RNU2-53P-201ENST00000516257 147 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC069113.1-201ENST00000517763 267 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC109479.2-201ENST00000517842 174 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms