Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC2.22□□□□□ -2.05
PCP4P48539 SNORD53-201ENST00000579969 78 ntBASIC2.22□□□□□ -2.05
PCP4P48539 YPEL5P2-201ENST00000605553 359 ntBASIC2.22□□□□□ -2.05
PCP4P48539 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
PCP4P48539 RNU1-58P-201ENST00000362413 163 ntBASIC2.21□□□□□ -2.06
PCP4P48539 Y_RNA.183-201ENST00000363882 113 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RNU6-1175P-201ENST00000365200 107 ntBASIC2.21□□□□□ -2.06
PCP4P48539 Y_RNA.570-201ENST00000384750 101 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RNU11-3P-201ENST00000391111 133 ntBASIC2.21□□□□□ -2.06
PCP4P48539 MIR1283-2-201ENST00000408621 87 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RNU6-121P-201ENST00000410525 99 ntBASIC2.21□□□□□ -2.06
PCP4P48539 AL589794.1-201ENST00000424971 390 ntBASIC2.21□□□□□ -2.06
PCP4P48539 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.21□□□□□ -2.06
PCP4P48539 PGAM4-201ENST00000458128 765 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PCP4P48539 MTND5P22-201ENST00000458380 195 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RNU1-131P-201ENST00000458943 161 ntBASIC2.21□□□□□ -2.06
PCP4P48539 AP001486.1-201ENST00000463339 476 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RN7SL594P-201ENST00000470590 287 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RN7SL568P-201ENST00000493069 298 ntBASIC2.21□□□□□ -2.06
PCP4P48539 AC107222.1-201ENST00000510899 637 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RNU6-1041P-201ENST00000516254 102 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RNY3P15-201ENST00000516297 97 ntBASIC2.21□□□□□ -2.06
PCP4P48539 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.21□□□□□ -2.06
PCP4P48539 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.21□□□□□ -2.06
PCP4P48539 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PCP4P48539 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.21□□□□□ -2.06
PCP4P48539 MIR4253-201ENST00000581187 68 ntBASIC2.21□□□□□ -2.06
PCP4P48539 MIR3922-201ENST00000585192 84 ntBASIC2.21□□□□□ -2.06
PCP4P48539 AC136443.5-201ENST00000603741 370 ntBASIC2.21□□□□□ -2.06
PCP4P48539 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PCP4P48539 AC006971.1-201ENST00000407916 4486 ntBASIC2.21□□□□□ -2.06
PCP4P48539 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PCP4P48539 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PCP4P48539 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.2□□□□□ -2.06
PCP4P48539 Y_RNA.64-201ENST00000362845 102 ntBASIC2.2□□□□□ -2.06
PCP4P48539 RNU6-1310P-201ENST00000384153 107 ntBASIC2.2□□□□□ -2.06
PCP4P48539 Y_RNA.512-201ENST00000384518 102 ntBASIC2.2□□□□□ -2.06
PCP4P48539 RPL21P1-201ENST00000399532 476 ntBASIC2.2□□□□□ -2.06
PCP4P48539 U3.40-201ENST00000408706 208 ntBASIC2.2□□□□□ -2.06
PCP4P48539 RNU4-30P-201ENST00000410245 143 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AC114755.2-201ENST00000413520 361 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.2□□□□□ -2.06
PCP4P48539 HMGN2P3-201ENST00000433603 273 ntBASIC2.2□□□□□ -2.06
PCP4P48539 HMGN2P5-201ENST00000436882 273 ntBASIC2.2□□□□□ -2.06
PCP4P48539 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.2□□□□□ -2.06
PCP4P48539 Z75741.1-201ENST00000446793 314 ntBASIC2.2□□□□□ -2.06
PCP4P48539 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.2□□□□□ -2.06
PCP4P48539 AC115115.1-201ENST00000449927 248 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AC117440.1-201ENST00000474107 571 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AC098869.1-201ENST00000481627 292 ntBASIC2.2□□□□□ -2.06
PCP4P48539 RN7SL633P-201ENST00000488974 297 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AC016559.1-201ENST00000511420 199 ntBASIC2.2□□□□□ -2.06
PCP4P48539 SNORA40.15-201ENST00000516884 107 ntBASIC2.2□□□□□ -2.06
PCP4P48539 Y_RNA.713-201ENST00000517013 96 ntBASIC2.2□□□□□ -2.06
PCP4P48539 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PCP4P48539 AL049872.1-201ENST00000556323 322 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.2□□□□□ -2.06
PCP4P48539 MIR5004-201ENST00000579078 107 ntBASIC2.2□□□□□ -2.06
PCP4P48539 MIR4776-2-201ENST00000580204 80 ntBASIC2.2□□□□□ -2.06
PCP4P48539 MIR4423-201ENST00000580922 80 ntBASIC2.2□□□□□ -2.06
PCP4P48539 MIR4300-201ENST00000581016 96 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AP001437.1-201ENST00000608783 456 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AL137847.3-201ENST00000611521 109 ntBASIC2.2□□□□□ -2.06
PCP4P48539 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC2.2□□□□□ -2.06
PCP4P48539 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PCP4P48539 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.2□□□□□ -2.06
PCP4P48539 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.19□□□□□ -2.06
PCP4P48539 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PCP4P48539 Y_RNA.19-201ENST00000362462 99 ntBASIC2.19□□□□□ -2.06
PCP4P48539 RNU6-770P-201ENST00000363929 105 ntBASIC2.19□□□□□ -2.06
PCP4P48539 Y_RNA.230-201ENST00000364348 109 ntBASIC2.19□□□□□ -2.06
PCP4P48539 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCP4P48539 AL353133.1-201ENST00000407695 401 ntBASIC2.19□□□□□ -2.06
PCP4P48539 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCP4P48539 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.19□□□□□ -2.06
PCP4P48539 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PCP4P48539 RPL23AP3-201ENST00000453844 468 ntBASIC2.19□□□□□ -2.06
PCP4P48539 AC008155.2-201ENST00000464337 397 ntBASIC2.19□□□□□ -2.06
PCP4P48539 RN7SL177P-201ENST00000476596 299 ntBASIC2.19□□□□□ -2.06
PCP4P48539 AL049873.1-201ENST00000480540 376 ntBASIC2.19□□□□□ -2.06
PCP4P48539 AC011406.1-201ENST00000512440 370 ntBASIC2.19□□□□□ -2.06
PCP4P48539 RNU6-1045P-201ENST00000516321 107 ntBASIC2.19□□□□□ -2.06
PCP4P48539 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
PCP4P48539 RNU2-12P-201ENST00000517216 168 ntBASIC2.19□□□□□ -2.06
PCP4P48539 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC2.19□□□□□ -2.06
PCP4P48539 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC2.19□□□□□ -2.06
PCP4P48539 AC027419.1-201ENST00000522976 328 ntBASIC2.19□□□□□ -2.06
PCP4P48539 AC026333.2-201ENST00000542164 106 ntBASIC2.19□□□□□ -2.06
PCP4P48539 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.19□□□□□ -2.06
PCP4P48539 TP53TG1_2.1-201ENST00000611226 182 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.15-201ENST00000611544 191 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.16-201ENST00000613119 191 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.12-201ENST00000613778 191 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.20-201ENST00000613956 192 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.9-201ENST00000615427 191 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.11-201ENST00000616345 191 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.2-201ENST00000616535 191 ntBASIC2.19□□□□□ -2.06
PCP4P48539 MIR376A1-201ENST00000616574 68 ntBASIC2.19□□□□□ -2.06
PCP4P48539 U2.3-201ENST00000617785 191 ntBASIC2.19□□□□□ -2.06
PCP4P48539 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms