Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
BRCC3P46736 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
BRCC3P46736 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
BRCC3P46736 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.09□□□□□ -2.08
BRCC3P46736 SNORD56.1-201ENST00000362913 68 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 RNU6-254P-201ENST00000363377 107 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 SNORA38-201ENST00000363946 132 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 RNA5SP125-201ENST00000364843 120 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 RNU5E-7P-201ENST00000365290 117 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 RNU6-827P-201ENST00000365553 106 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 RNU6-622P-201ENST00000384272 103 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AC019129.1-201ENST00000403786 261 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 RNU2-20P-201ENST00000410425 191 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AL117339.3-201ENST00000418733 162 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
BRCC3P46736 AL445685.2-201ENST00000422551 342 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 EIF4EP4-201ENST00000424916 578 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCC3P46736 AC007969.2-201ENST00000441891 191 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCC3P46736 RPL23AP7-203ENST00000449021 469 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AC013470.1-201ENST00000453438 462 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AC112771.1-201ENST00000463581 102 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCC3P46736 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCC3P46736 CYCSP27-201ENST00000527643 293 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCC3P46736 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.08□□□□□ -2.08
BRCC3P46736 AC009127.3-201ENST00000570531 403 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.08□□□□□ -2.08
BRCC3P46736 AC021646.1-201ENST00000605469 484 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 SNORD14A-201ENST00000606526 91 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AL357078.3-201ENST00000607528 618 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 MIR5739-201ENST00000619803 80 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AC100810.6-201ENST00000638068 285 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 AC121333.1-201ENST00000567488 2709 ntBASIC2.08□□□□□ -2.08
BRCC3P46736 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
BRCC3P46736 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 Y_RNA.40-201ENST00000362645 93 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 SNORD114-19-201ENST00000363072 75 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 RNU6-336P-201ENST00000364891 107 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 RNA5SP240-201ENST00000365355 128 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.07□□□□□ -2.08
BRCC3P46736 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 RNA5SP390-201ENST00000410191 113 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 CYCSP48-201ENST00000417124 323 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 AL513185.2-201ENST00000425543 193 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 AC007677.1-201ENST00000445757 515 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 RPL7P12-201ENST00000446719 750 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 AL031274.1-201ENST00000450334 232 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.07□□□□□ -2.08
BRCC3P46736 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 FAM206BP-201ENST00000510179 541 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 AC092436.3-201ENST00000511788 257 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 SMURF2P1-201ENST00000514992 481 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 RNU6-323P-201ENST00000521915 107 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.07□□□□□ -2.08
BRCC3P46736 PSMA3P-201ENST00000555485 635 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 U6atac.1-201ENST00000616025 117 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
BRCC3P46736 AC002543.1-201ENST00000299783 1954 ntBASIC2.07□□□□□ -2.08
BRCC3P46736 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
BRCC3P46736 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
BRCC3P46736 RNU6-105P-201ENST00000363909 104 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 RNU6-1283P-201ENST00000365314 105 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
BRCC3P46736 Y_RNA.390-201ENST00000383932 102 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 RNU6-692P-201ENST00000384496 107 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 Y_RNA.573-201ENST00000384763 105 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 EIF4E2P1-201ENST00000393781 255 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
BRCC3P46736 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
BRCC3P46736 RBMX2P4-201ENST00000441256 376 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 AC243964.1-201ENST00000441814 261 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.06□□□□□ -2.08
BRCC3P46736 AC012308.1-201ENST00000451232 178 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 CYP2C59P-201ENST00000457790 269 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 RPL23AP63-201ENST00000498752 471 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.06□□□□□ -2.08
BRCC3P46736 RNU6-377P-201ENST00000515965 102 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 SNORA19.2-201ENST00000516013 114 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 RNU6-548P-201ENST00000517083 115 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 AC104576.1-201ENST00000524225 88 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.06□□□□□ -2.08
BRCC3P46736 AC025423.5-201ENST00000550230 219 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 MIR3941-201ENST00000582572 103 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 MIR3672-201ENST00000584290 82 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 AC009314.1-201ENST00000603871 304 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 AL138963.2-201ENST00000605137 226 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.06□□□□□ -2.08
BRCC3P46736 Y_RNA.86-201ENST00000363020 111 ntBASIC2.05□□□□□ -2.08
BRCC3P46736 RNU6-831P-201ENST00000384548 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms