Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
MSH5O43196 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC7.27□□□□□ -1.25
MSH5O43196 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH5O43196 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH5O43196 SNORA22.1-201ENST00000362701 134 ntBASIC7.27□□□□□ -1.25
MSH5O43196 RNU6-655P-201ENST00000362858 107 ntBASIC7.27□□□□□ -1.25
MSH5O43196 SNORD45A-201ENST00000384512 84 ntBASIC7.27□□□□□ -1.25
MSH5O43196 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.27□□□□□ -1.25
MSH5O43196 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC7.27□□□□□ -1.25
MSH5O43196 RNU7-96P-201ENST00000459535 64 ntBASIC7.27□□□□□ -1.25
MSH5O43196 AC104027.1-201ENST00000521887 300 ntBASIC7.27□□□□□ -1.25
MSH5O43196 AL162431.4-201ENST00000604674 411 ntBASIC7.27□□□□□ -1.25
MSH5O43196 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH5O43196 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH5O43196 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH5O43196 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
MSH5O43196 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
MSH5O43196 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MSH5O43196 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
MSH5O43196 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MSH5O43196 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MSH5O43196 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.26□□□□□ -1.25
MSH5O43196 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MSH5O43196 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
MSH5O43196 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MSH5O43196 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
MSH5O43196 RNA5SP305-201ENST00000362665 119 ntBASIC7.26□□□□□ -1.25
MSH5O43196 SNORD32B-201ENST00000364460 84 ntBASIC7.26□□□□□ -1.25
MSH5O43196 MIR195-201ENST00000385194 87 ntBASIC7.26□□□□□ -1.25
MSH5O43196 AC083982.1-201ENST00000485679 344 ntBASIC7.26□□□□□ -1.25
MSH5O43196 MIR449C-201ENST00000516047 92 ntBASIC7.26□□□□□ -1.25
MSH5O43196 AC126177.5-201ENST00000549599 178 ntBASIC7.26□□□□□ -1.25
MSH5O43196 AC024220.1-201ENST00000603675 484 ntBASIC7.26□□□□□ -1.25
MSH5O43196 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
MSH5O43196 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
MSH5O43196 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC7.26□□□□□ -1.25
MSH5O43196 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
MSH5O43196 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MSH5O43196 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MSH5O43196 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC7.26□□□□□ -1.25
MSH5O43196 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC7.26□□□□□ -1.25
MSH5O43196 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MSH5O43196 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
MSH5O43196 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.25□□□□□ -1.25
MSH5O43196 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
MSH5O43196 AP004607.3-201ENST00000530354 3915 ntBASIC7.25□□□□□ -1.25
MSH5O43196 RNU6ATAC33P-201ENST00000408647 126 ntBASIC7.25□□□□□ -1.25
MSH5O43196 SNRPGP5-201ENST00000456003 220 ntBASIC7.25□□□□□ -1.25
MSH5O43196 RNU7-85P-201ENST00000458851 63 ntBASIC7.25□□□□□ -1.25
MSH5O43196 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC7.25□□□□□ -1.25
MSH5O43196 AC234781.5-201ENST00000508429 271 ntBASIC7.25□□□□□ -1.25
MSH5O43196 ATP5J2P6-201ENST00000565203 266 ntBASIC7.25□□□□□ -1.25
MSH5O43196 AC000068.2-201ENST00000608816 460 ntBASIC7.25□□□□□ -1.25
MSH5O43196 AC069503.3-201ENST00000618674 145 ntBASIC7.25□□□□□ -1.25
MSH5O43196 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
MSH5O43196 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MSH5O43196 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.25□□□□□ -1.25
MSH5O43196 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MSH5O43196 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MSH5O43196 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
MSH5O43196 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC7.24□□□□□ -1.25
MSH5O43196 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MSH5O43196 Y_RNA.12-201ENST00000362393 112 ntBASIC7.24□□□□□ -1.25
MSH5O43196 HSPE1P12-201ENST00000412576 301 ntBASIC7.24□□□□□ -1.25
MSH5O43196 AL161651.1-201ENST00000440882 223 ntBASIC7.24□□□□□ -1.25
MSH5O43196 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.24□□□□□ -1.25
MSH5O43196 RN7SL570P-201ENST00000484405 292 ntBASIC7.24□□□□□ -1.25
MSH5O43196 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC7.24□□□□□ -1.25
MSH5O43196 MTND5P40-201ENST00000559945 246 ntBASIC7.24□□□□□ -1.25
MSH5O43196 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.24□□□□□ -1.25
MSH5O43196 AC090607.5-201ENST00000615692 224 ntBASIC7.24□□□□□ -1.25
MSH5O43196 AC091953.3-201ENST00000623220 236 ntBASIC7.24□□□□□ -1.25
MSH5O43196 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
MSH5O43196 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
MSH5O43196 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC7.24□□□□□ -1.25
MSH5O43196 AC083843.2-201ENST00000568248 6253 ntBASIC7.24□□□□□ -1.25
MSH5O43196 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.24□□□□□ -1.25
MSH5O43196 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
MSH5O43196 AC004944.1-201ENST00000517807 3059 ntBASIC7.24□□□□□ -1.25
MSH5O43196 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
MSH5O43196 SNORA1B-201ENST00000362535 133 ntBASIC7.23□□□□□ -1.25
MSH5O43196 RNU6-865P-201ENST00000364772 107 ntBASIC7.23□□□□□ -1.25
MSH5O43196 RNU1-43P-201ENST00000365052 165 ntBASIC7.23□□□□□ -1.25
MSH5O43196 RNA5SP292-201ENST00000390974 118 ntBASIC7.23□□□□□ -1.25
MSH5O43196 RPS29P22-201ENST00000472363 168 ntBASIC7.23□□□□□ -1.25
MSH5O43196 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.23□□□□□ -1.25
MSH5O43196 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.23□□□□□ -1.25
MSH5O43196 AC022655.2-201ENST00000577280 318 ntBASIC7.23□□□□□ -1.25
MSH5O43196 AC067747.1-201ENST00000608026 250 ntBASIC7.23□□□□□ -1.25
MSH5O43196 AL137790.1-201ENST00000634283 177 ntBASIC7.23□□□□□ -1.25
MSH5O43196 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
MSH5O43196 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
MSH5O43196 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
MSH5O43196 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.23□□□□□ -1.25
MSH5O43196 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
MSH5O43196 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
MSH5O43196 AL353796.1-201ENST00000561542 3241 ntBASIC7.23□□□□□ -1.25
MSH5O43196 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
MSH5O43196 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.23□□□□□ -1.25
MSH5O43196 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms