Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 AC044860.2-201ENST00000561005 179 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 AL355297.3-201ENST00000604082 446 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 AL121655.1-201ENST00000605811 308 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 AC068870.2-201ENST00000620635 389 ntBASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.73□□□□□ -1.65
GTF3C3Q9Y5Q9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 MIR561-201ENST00000385216 97 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 SNORD78.2-201ENST00000391076 69 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 SDAD1P3-201ENST00000427380 333 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 snoU13.22-201ENST00000459428 104 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 CENPBD1P1-201ENST00000464061 469 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 RN7SL132P-201ENST00000478131 296 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 MIR5006-201ENST00000583027 110 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 MIR6719-201ENST00000622428 87 ntBASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
GTF3C3Q9Y5Q9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
GTF3C3Q9Y5Q9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-793P-201ENST00000384233 104 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 MIR105-2-201ENST00000385083 81 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 SNORA12-201ENST00000391162 147 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 AC113618.1-201ENST00000416747 285 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 AC003685.2-201ENST00000422795 395 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 YME1L1P1-201ENST00000429435 297 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 AC004386.2-201ENST00000441858 148 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 U8.20-201ENST00000459445 131 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU2-27P-201ENST00000516185 142 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 AC113195.1-201ENST00000579952 141 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 MIR4646-201ENST00000580775 63 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 AC136443.5-201ENST00000603741 370 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 MIR7155-201ENST00000615925 56 ntBASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.71□□□□□ -1.66
GTF3C3Q9Y5Q9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 FCF1P4-201ENST00000448326 183 ntBASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 RNA5SP385-201ENST00000515947 110 ntBASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 SNORA48.11-201ENST00000517015 89 ntBASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 IPO5P1-202ENST00000600039 287 ntBASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 AL356274.2-201ENST00000624379 3752 ntBASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GTF3C3Q9Y5Q9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-546P-201ENST00000383991 107 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-1145P-201ENST00000384246 107 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU2-25P-201ENST00000411041 191 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 AC009237.7-201ENST00000447357 229 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU5F-4P-201ENST00000516581 114 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 RNU6-344P-201ENST00000516635 111 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 SNORA70.19-201ENST00000516717 90 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 AC211433.2-201ENST00000608433 387 ntBASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
GTF3C3Q9Y5Q9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 SNORA18.2-201ENST00000383865 132 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 Y_RNA.471-201ENST00000384312 102 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 MIR329-1-201ENST00000385028 80 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 SNORD12B-201ENST00000410433 91 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 RPS29P17-201ENST00000430795 166 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AL353705.1-201ENST00000433468 480 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 RPS29P2-201ENST00000479278 136 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AC091826.1-201ENST00000514065 313 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AC109329.2-201ENST00000519658 482 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AC034114.1-201ENST00000520293 285 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AC125232.2-201ENST00000592457 143 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 Y_RNA.772-201ENST00000606692 102 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AL021879.1-201ENST00000611756 288 ntBASIC4.68□□□□□ -1.66
GTF3C3Q9Y5Q9 AL078596.1-201ENST00000624856 447 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms