Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL157831.1-201ENST00000426134 473 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 AC027124.2-201ENST00000428249 105 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-513P-201ENST00000516104 104 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 MIR5006-201ENST00000583027 110 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 RPL37P4-201ENST00000448908 268 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 RN7SL303P-201ENST00000469773 251 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 RN7SL860P-201ENST00000473738 223 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 AC011406.1-201ENST00000512440 370 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 AC007751.1-201ENST00000529260 376 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 AC022254.1-201ENST00000567857 235 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 MIR5588-201ENST00000581890 63 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 AC006133.1-201ENST00000617106 264 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 AC140479.6-201ENST00000633535 357 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 AC093591.2-201ENST00000565254 3843 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 AC008079.2-201ENST00000623543 20396 ntBASIC5.68□□□□□ -1.5
TRIM35Q9UPQ4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 Y_RNA.437-201ENST00000384113 113 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-675P-201ENST00000384236 104 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-622P-201ENST00000384272 103 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 SNORD66.1-201ENST00000391230 76 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 MIR1911-201ENST00000410783 80 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 AC023449.1-201ENST00000454464 154 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 AC091167.1-201ENST00000492017 396 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 AIG1P1-201ENST00000503376 148 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 AC083906.5-201ENST00000503722 328 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 SCARNA23-201ENST00000516060 130 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-126P-201ENST00000516685 103 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 CYCSP29-201ENST00000533731 318 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 SMG1P4-204ENST00000523028 4131 ntBASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM35Q9UPQ4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 AL022322.2-201ENST00000624072 20397 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 AC002543.1-201ENST00000299783 1954 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 Y_RNA.265-201ENST00000364677 108 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 RNA5SP366-201ENST00000365454 123 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 RNU1-73P-201ENST00000383971 164 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 U8.12-201ENST00000384701 133 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 NDUFB4P6-201ENST00000436819 366 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 RNA5SP49-201ENST00000516450 115 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 AC010266.2-201ENST00000564741 3255 ntBASIC5.66□□□□□ -1.5
TRIM35Q9UPQ4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-487P-201ENST00000365430 104 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 SNORA67.2-201ENST00000384300 149 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 MIR153-1-201ENST00000384914 90 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 MIR759-201ENST00000390224 91 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 AL117342.1-201ENST00000404861 406 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 AC011998.1-201ENST00000433403 117 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 RNU7-171P-201ENST00000459581 62 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 RN7SL812P-201ENST00000493791 279 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 MTND6P33-201ENST00000571794 183 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 PCGEM1.1-201ENST00000613431 131 ntBASIC5.65□□□□□ -1.5
TRIM35Q9UPQ4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM35Q9UPQ4 Z95331.1-201ENST00000623075 23112 ntBASIC5.65□□□□□ -1.51
TRIM35Q9UPQ4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM35Q9UPQ4 MUC2-202ENST00000613187 4845 ntBASIC5.65□□□□□ -1.51
TRIM35Q9UPQ4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms