Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LHX6Q9UPM6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LHX6Q9UPM6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LHX6Q9UPM6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 MIR208A-201ENST00000362287 71 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 SNORA62.3-201ENST00000365110 153 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 SNORA12-201ENST00000391162 147 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 MIR300-201ENST00000401138 83 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 MIR1283-1-201ENST00000408494 87 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 RN7SL197P-201ENST00000466981 299 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 MRPS17P9-201ENST00000511924 393 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 AC011604.1-201ENST00000545978 196 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX6Q9UPM6 Z95331.1-201ENST00000623075 23112 ntBASIC4.8□□□□□ -1.64
LHX6Q9UPM6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 FAM35CP-201ENST00000554755 2470 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 AC092376.2-201ENST00000622621 4116 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 RNU6-349P-201ENST00000362402 107 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 RNU6-944P-201ENST00000364023 107 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 RNY1P6-201ENST00000384193 109 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 RN7SL319P-201ENST00000480656 221 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 RNU5F-4P-201ENST00000516581 114 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 AC023632.4-201ENST00000517783 191 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 CYCSP29-201ENST00000533731 318 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 RN7SL690P-201ENST00000582087 240 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 MIR3158-1-201ENST00000583596 81 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 AC012493.2-201ENST00000595083 291 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 uc_338.7-201ENST00000621834 124 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 AC104964.3-201ENST00000606115 2860 ntBASIC4.79□□□□□ -1.64
LHX6Q9UPM6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LHX6Q9UPM6 AC022893.2-201ENST00000564832 3296 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 AC007496.3-201ENST00000624987 3443 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RNU6-170P-201ENST00000362832 104 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RNU6-655P-201ENST00000362858 107 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 SNORA33-201ENST00000363664 130 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 SNORD56.6-201ENST00000384569 71 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RNU6-1104P-201ENST00000384723 104 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RNU6-750P-201ENST00000390946 107 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 MIR1182-201ENST00000408363 97 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 AL441985.1-201ENST00000457727 251 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RNU6-267P-201ENST00000516714 103 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RNU6-1098P-201ENST00000516772 96 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RN7SKP282-201ENST00000516824 299 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RNA5SP230-201ENST00000517039 122 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 RN7SKP289-201ENST00000517244 295 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 MIR4753-201ENST00000585119 83 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 AC006130.2-201ENST00000586202 326 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 AC012531.4-201ENST00000616509 177 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 MIR6715B-201ENST00000637172 77 ntBASIC4.78□□□□□ -1.64
LHX6Q9UPM6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX6Q9UPM6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms