Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 U8.10-201ENST00000384260 133 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 SNORA17.3-201ENST00000391159 129 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 RPL23AP32-201ENST00000395315 459 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC010975.2-201ENST00000427781 588 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC244670.1-201ENST00000436879 112 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AL512286.1-201ENST00000439244 400 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC010095.1-201ENST00000443543 144 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC034244.1-201ENST00000507687 207 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC108078.1-201ENST00000508073 725 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 Y_RNA.672-201ENST00000516289 104 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 SCARNA24.1-201ENST00000516465 137 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 RNA5SP437-201ENST00000517249 129 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC012414.6-201ENST00000568241 401 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC073413.2-201ENST00000604332 360 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC069114.2-201ENST00000604699 304 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 TUSC7.1-201ENST00000610969 165 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC083806.3-201ENST00000614016 455 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC007671.2-201ENST00000637344 619 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC006927.3-201ENST00000638789 384 ntBASIC1.1□□□□□ -2.23
VAPAQ9P0L0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VAPAQ9P0L0 AC010615.1-201ENST00000594254 1764 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
VAPAQ9P0L0 RNU6-1141P-201ENST00000364520 107 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 RNU4-56P-201ENST00000364700 142 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 SNORD115-7-201ENST00000365306 82 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 SNORA32.2-201ENST00000384049 122 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 RNA5SP213-201ENST00000391031 106 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 SNORA12.2-201ENST00000391040 156 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 MRPL35P1-201ENST00000404272 572 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 MTCYBP2-201ENST00000407745 171 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 OR6C66P-201ENST00000414917 930 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 AC098592.1-201ENST00000419352 333 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 FTH1P12-201ENST00000432137 551 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.09□□□□□ -2.23
VAPAQ9P0L0 AC099677.2-201ENST00000436385 175 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.09□□□□□ -2.23
VAPAQ9P0L0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.09□□□□□ -2.23
VAPAQ9P0L0 ZNF321P-202ENST00000550843 495 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 AC005771.1-201ENST00000585581 349 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.09□□□□□ -2.23
VAPAQ9P0L0 AC107304.1-201ENST00000604229 296 ntBASIC1.09□□□□□ -2.23
VAPAQ9P0L0 AC106754.1-201ENST00000562632 1513 ntBASIC1.09□□□□□ -2.24
VAPAQ9P0L0 AL159152.1-201ENST00000635019 2587 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VAPAQ9P0L0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VAPAQ9P0L0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
VAPAQ9P0L0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VAPAQ9P0L0 RNU6-862P-201ENST00000362804 105 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 SNORD113-6-201ENST00000363345 75 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
VAPAQ9P0L0 AL354692.1-201ENST00000423044 315 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 TOMM22P2-201ENST00000430735 237 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 AC245047.4-201ENST00000433189 144 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 USP9YP12-201ENST00000450481 570 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.08□□□□□ -2.24
VAPAQ9P0L0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.08□□□□□ -2.24
VAPAQ9P0L0 AC090115.3-201ENST00000553218 849 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 AC112191.3-201ENST00000604371 277 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 AL451064.1-201ENST00000607718 471 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 AC009159.2-201ENST00000617603 606 ntBASIC1.08□□□□□ -2.24
VAPAQ9P0L0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
VAPAQ9P0L0 SNORD33-201ENST00000362761 85 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 RNU6-428P-201ENST00000362942 107 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 RNU6-336P-201ENST00000364891 107 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 RNU5E-5P-201ENST00000365379 116 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 AC106883.1-201ENST00000418805 562 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 AL356583.2-201ENST00000426536 280 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.07□□□□□ -2.24
VAPAQ9P0L0 ATP5J2P3-201ENST00000451550 258 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 OR2AQ1P-201ENST00000451972 200 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 RN7SKP210-201ENST00000459176 261 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 RNU7-14P-201ENST00000459331 62 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 TOMM22P6-201ENST00000465035 409 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 RPL30P7-201ENST00000479312 323 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.07□□□□□ -2.24
VAPAQ9P0L0 AC104136.1-201ENST00000512969 394 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 RNU6-1178P-201ENST00000516674 107 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 SNORD60.2-201ENST00000516883 86 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 ELOCP32-201ENST00000548625 324 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 HSPE1P4-201ENST00000550617 308 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.07□□□□□ -2.24
VAPAQ9P0L0 MTND1P8-201ENST00000571424 950 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 SNORA59B-202ENST00000578183 701 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 MIR3923-201ENST00000579521 83 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 AL391834.2-201ENST00000609982 546 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
VAPAQ9P0L0 U6.114-201ENST00000636407 96 ntBASIC1.07□□□□□ -2.24
VAPAQ9P0L0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
VAPAQ9P0L0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms