Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RPS15AP7-201ENST00000439294 405 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 SNORD116-28-201ENST00000516123 91 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 AL391261.3-201ENST00000557194 520 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 MIR4782-201ENST00000577987 79 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 AC020895.1-201ENST00000595362 272 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 AL161756.2-201ENST00000604597 246 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 U6.98-201ENST00000637157 84 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-858P-201ENST00000362436 107 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU4-35P-201ENST00000362588 141 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-1159P-201ENST00000362933 107 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-682P-201ENST00000363843 106 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-47P-201ENST00000383866 107 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-17P-201ENST00000384245 107 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-198P-201ENST00000384258 104 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-18P-201ENST00000384527 107 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 SNORD17-201ENST00000390930 237 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 SNORA53-201ENST00000391141 249 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 Y_RNA.626-201ENST00000411288 95 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 AL606753.1-201ENST00000427435 87 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 AC005002.2-201ENST00000438228 269 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 AC124916.1-201ENST00000444020 547 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 AC016700.2-201ENST00000446011 156 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RPL23AP14-201ENST00000468281 468 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RN7SL330P-201ENST00000469709 307 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 AL049830.2-201ENST00000480072 201 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 Y_RNA.683-201ENST00000516508 93 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RNU6-711P-201ENST00000517255 106 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RPL23AP88-201ENST00000605759 454 ntBASIC3.69□□□□□ -1.82
RNF38Q9H0F5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF38Q9H0F5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 RNU6-740P-201ENST00000364734 105 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 MIR591-201ENST00000385290 95 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 SNORD12B-201ENST00000410433 91 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 RNU6-651P-201ENST00000411040 105 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 RNA5SP31-201ENST00000411144 127 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC087477.1-201ENST00000465747 340 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 SNRPGP7-201ENST00000469016 106 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 RPS29P20-201ENST00000489592 171 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AF186996.7-201ENST00000492781 209 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 SEPT14P8-201ENST00000508026 178 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 SNORA43.2-201ENST00000516652 128 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 MIR7851-201ENST00000610611 160 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC006504.1-201ENST00000562493 3666 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RNF38Q9H0F5 AC135776.4-201ENST00000624300 1904 ntBASIC3.68□□□□□ -1.82
RNF38Q9H0F5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 RNA5SP267-201ENST00000364893 126 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 RNU6-898P-201ENST00000365627 104 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 U3.37-201ENST00000408528 213 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 EIF1P2-201ENST00000428233 350 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 AL031659.1-201ENST00000447075 539 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 AL031183.1-201ENST00000457667 207 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 RPS27AP10-201ENST00000496103 208 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 RNU6-1278P-201ENST00000516130 107 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 RNU7-110P-201ENST00000516891 62 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 RNU6-1183P-201ENST00000517054 60 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 NACAP3-201ENST00000552100 481 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 CYCSP39-201ENST00000565821 309 ntBASIC3.67□□□□□ -1.82
RNF38Q9H0F5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms