Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 AK6P2-201ENST00000549020 471 ntBASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 SNRPGP15-201ENST00000600149 222 ntBASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 AC136601.2-201ENST00000604356 474 ntBASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 AC072026.1-201ENST00000605023 201 ntBASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 RPL23AP88-201ENST00000605759 454 ntBASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 Z73965.1-201ENST00000623412 2297 ntBASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CNTNAP4Q9C0A0 AC018555.1-201ENST00000567548 1980 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RNY4P28-201ENST00000365281 93 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-47P-201ENST00000383866 107 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RNU6-968P-201ENST00000384076 107 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RNU1-139P-201ENST00000391307 165 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RNA5SP31-201ENST00000411144 127 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RPS12P23-201ENST00000419579 400 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 SNRPEP9-201ENST00000436794 238 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 AC009237.8-201ENST00000445492 379 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 HSPE1P25-201ENST00000455484 251 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RN7SL93P-201ENST00000463035 293 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 KC877373.1-201ENST00000479066 408 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 RNU2-31P-201ENST00000516954 155 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 AF186190.1-201ENST00000517470 480 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 MIR4782-201ENST00000577987 79 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 AL590240.4-201ENST00000616908 390 ntBASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNTNAP4Q9C0A0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CNTNAP4Q9C0A0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CNTNAP4Q9C0A0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CNTNAP4Q9C0A0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-804P-201ENST00000384286 107 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 MIR124-3-201ENST00000384866 87 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 snoU13.4-201ENST00000458916 104 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 RPL21P104-201ENST00000464143 478 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 TOMM22P6-201ENST00000465035 409 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 VWA8P1-201ENST00000510889 176 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-1198P-201ENST00000516904 67 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-703P-201ENST00000516946 107 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 H3F3AP1-201ENST00000559984 334 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 AL162424.1-201ENST00000602325 221 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 AP001485.1-201ENST00000604799 199 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 AC131238.1-201ENST00000617135 328 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 MIR622-201ENST00000638396 96 ntBASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNTNAP4Q9C0A0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-527P-201ENST00000363425 104 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-142P-201ENST00000384019 107 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-843P-201ENST00000384454 104 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 Y_RNA.626-201ENST00000411288 95 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 AC092047.1-201ENST00000424997 240 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 AL139132.1-201ENST00000431587 344 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 RPS6P12-201ENST00000432491 726 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 RPS15AP7-201ENST00000439294 405 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 Z82210.1-201ENST00000440037 231 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 AL353705.4-201ENST00000449661 238 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 SNORD108-201ENST00000459332 71 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-1114P-201ENST00000516022 107 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-479P-201ENST00000516348 105 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 SNORA70.16-201ENST00000516390 95 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 SNORA43.2-201ENST00000516652 128 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 AP004607.1-201ENST00000524456 203 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 LINC00933-203ENST00000559812 219 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 AL360157.1-201ENST00000565962 87 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 AC010928.2-201ENST00000588017 287 ntBASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNTNAP4Q9C0A0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 SNORA22C-201ENST00000384614 134 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 RPS4XP3-201ENST00000398541 413 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-1245P-201ENST00000411130 106 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms