Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-884P-201ENST00000363889 107 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 Y_RNA.323-201ENST00000365157 109 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 MIR34B-201ENST00000385076 84 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 Z98745.1-201ENST00000402553 494 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 AL590004.2-201ENST00000404787 371 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 AC010531.2-201ENST00000465012 153 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 AC021205.2-201ENST00000480069 347 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 SNORA31.8-201ENST00000516327 108 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 RNU6-1337P-201ENST00000516525 95 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 MIR4458-201ENST00000578872 75 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 MIR5685-201ENST00000579080 79 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 AL034555.1-201ENST00000604816 211 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 PCGEM1.1-201ENST00000613431 131 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRCH3Q96II8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRCH3Q96II8 AC002543.1-201ENST00000299783 1954 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH3Q96II8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LRCH3Q96II8 RNA5SP22-201ENST00000365393 109 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 RNU6-1323P-201ENST00000384025 107 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 SNORA67.2-201ENST00000384300 149 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 MIR891A-201ENST00000401237 79 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 RNA5SP201-201ENST00000410316 124 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 RNA5SP296-201ENST00000410523 111 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 EIF4HP2-201ENST00000424380 563 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.88□□□□□ -1.63
LRCH3Q96II8 RN7SL585P-201ENST00000470538 280 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 ATP5EP1-201ENST00000510257 156 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
LRCH3Q96II8 RNA5SP153-201ENST00000516498 76 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 RNU1-104P-201ENST00000517280 175 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.88□□□□□ -1.63
LRCH3Q96II8 AC015720.1-201ENST00000565251 277 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH3Q96II8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH3Q96II8 AC008079.2-201ENST00000623543 20396 ntBASIC4.88□□□□□ -1.63
LRCH3Q96II8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH3Q96II8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH3Q96II8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.87□□□□□ -1.63
LRCH3Q96II8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.87□□□□□ -1.63
LRCH3Q96II8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
LRCH3Q96II8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH3Q96II8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH3Q96II8 RNU6-674P-201ENST00000363831 107 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 RNU6-335P-201ENST00000364563 113 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 SNORA18.2-201ENST00000383865 132 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 PTMAP5-201ENST00000393073 333 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 RNU2-70P-201ENST00000410718 179 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 TVP23BP1-201ENST00000557500 617 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 AC097639.2-201ENST00000603159 172 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 AC113403.1-201ENST00000604910 193 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 AC005000.2-201ENST00000605468 310 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 AC009093.8-201ENST00000641769 292 ntBASIC4.87□□□□□ -1.63
LRCH3Q96II8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH3Q96II8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH3Q96II8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH3Q96II8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LRCH3Q96II8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LRCH3Q96II8 AL136360.1-201ENST00000503377 1900 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH3Q96II8 MIR331-201ENST00000362302 94 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 RNU1-108P-201ENST00000362556 161 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 RNU6-228P-201ENST00000362700 106 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 Y_RNA.49-201ENST00000362714 112 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 SNORA63.5-201ENST00000363548 123 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 Y_RNA.634-201ENST00000364811 113 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 U8.12-201ENST00000384701 133 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 MIR590-201ENST00000385008 97 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 MIR548B-201ENST00000385247 97 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 RPL23AP82-202ENST00000427528 469 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 AL445687.1-201ENST00000439946 251 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 RPL23AP7-203ENST00000449021 469 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.86□□□□□ -1.63
LRCH3Q96II8 snoU13.4-201ENST00000458916 104 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 CENPBD1P1-201ENST00000464061 469 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 RPS27AP10-201ENST00000496103 208 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 SNORA18.4-201ENST00000516440 124 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 RNU6-709P-201ENST00000517257 104 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.86□□□□□ -1.63
LRCH3Q96II8 MIR4513-201ENST00000581077 86 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 SCARNA15.3-201ENST00000626315 122 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 SCARNA4.1-201ENST00000628597 123 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.86□□□□□ -1.63
LRCH3Q96II8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH3Q96II8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.86□□□□□ -1.63
LRCH3Q96II8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH3Q96II8 AC007256.1-201ENST00000392253 2765 ntBASIC4.86□□□□□ -1.63
LRCH3Q96II8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRCH3Q96II8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 AC126323.6-202ENST00000568092 3511 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 462.4 ms