Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 RNA5SP515-201ENST00000364570 118 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 RNA5SP513-201ENST00000364648 118 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 Y_RNA.280-201ENST00000364765 112 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 Y_RNA.369-201ENST00000365568 117 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 EI24P2-201ENST00000397776 1076 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 CBX3P9-201ENST00000402326 552 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 AL356535.1-201ENST00000440335 398 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 RPL30P5-201ENST00000494923 336 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 RN7SKP21-201ENST00000516503 220 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 MIR3939-201ENST00000582614 106 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 AC120024.3-201ENST00000603167 156 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 AC039056.2-201ENST00000622261 511 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 AC008555.8-201ENST00000623602 2168 ntBASIC4.33□□□□□ -1.72
LYSMD3Q7Z3D4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 Y_RNA.35-201ENST00000362601 101 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 RNU6-597P-201ENST00000365620 102 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 Y_RNA.495-201ENST00000384435 112 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 SNORD116-21-201ENST00000384507 92 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 MIR493-201ENST00000385254 89 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 SNORA48.5-201ENST00000391143 135 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC004866.1-201ENST00000411748 78 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 NDUFS5P4-201ENST00000412983 318 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AL158147.1-201ENST00000443970 75 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 Y_RNA.651-201ENST00000459380 103 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 RPS27AP10-201ENST00000496103 208 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC133485.4-201ENST00000561835 220 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC138907.4-201ENST00000570107 226 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 MIR3136-201ENST00000583498 78 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AL031274.2-201ENST00000599419 203 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 SNORD11B-201ENST00000607707 90 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC114781.5-201ENST00000615297 108 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AL591926.4-201ENST00000616895 298 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 snoZ196.1-201ENST00000625269 89 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AC022336.2-201ENST00000568966 2538 ntBASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LYSMD3Q7Z3D4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 RNU6-487P-201ENST00000365430 104 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 MIR124-3-201ENST00000384866 87 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 SNORD66.1-201ENST00000391230 76 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 MIR1302-4-201ENST00000408701 150 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 AIG1P1-201ENST00000503376 148 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 Y_RNA.692-201ENST00000516627 105 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 MIR3923-201ENST00000579521 83 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 AC068205.3-201ENST00000636385 468 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 Z73965.1-201ENST00000623412 2297 ntBASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.31□□□□□ -1.72
LYSMD3Q7Z3D4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 RNU1-132P-201ENST00000364300 164 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 Y_RNA.361-201ENST00000365515 120 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 RNU6-1336P-201ENST00000383886 109 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 RNY3P5-201ENST00000384127 102 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 MIR1193-201ENST00000408109 78 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 RNA5SP504-201ENST00000410676 117 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 AL157831.1-201ENST00000426134 473 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 RN7SL691P-201ENST00000494487 301 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 RNU6-1061P-201ENST00000516530 99 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 RNU6-344P-201ENST00000516635 111 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 MIR3138-201ENST00000585238 82 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 AC018692.3-201ENST00000623929 123 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 BMS1P21-201ENST00000634565 365 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 U6.115-201ENST00000636045 103 ntBASIC4.3□□□□□ -1.72
LYSMD3Q7Z3D4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms