Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 AL079305.1-201ENST00000623159 3008 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-1159P-201ENST00000362933 107 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 SNORD115-8-201ENST00000363856 82 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 SNORD115-38-201ENST00000365037 82 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-748P-201ENST00000384648 107 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.562-201ENST00000384695 113 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 SNORA26.3-201ENST00000391119 136 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 AP000567.1-201ENST00000406413 156 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 GPM6BP3-201ENST00000442797 145 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 AC016700.2-201ENST00000446011 156 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 AC010099.1-201ENST00000455434 375 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 RN7SKP272-201ENST00000516988 232 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 AC068831.7-201ENST00000616954 363 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 LINC02555-201ENST00000563933 1951 ntBASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RUFY4Q6ZNE9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 RNA5SP295-201ENST00000362655 121 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-1301P-201ENST00000362724 104 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-806P-201ENST00000365147 105 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-198P-201ENST00000384258 104 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.478-201ENST00000384358 107 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.483-201ENST00000384380 101 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.504-201ENST00000384481 104 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 SNORD115-46-201ENST00000390982 71 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 AC096649.2-201ENST00000416186 393 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 AC096920.1-201ENST00000423991 241 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 EIF1P2-201ENST00000428233 350 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 RPS15AP5-201ENST00000436276 388 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 AC244670.1-201ENST00000436879 112 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 AC006539.3-201ENST00000454258 129 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 AL441985.1-201ENST00000457727 251 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 TRBVB-201ENST00000477100 408 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 TGIF1P1-201ENST00000558095 802 ntBASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RUFY4Q6ZNE9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RBBP8P1-201ENST00000449447 1844 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.14-201ENST00000362415 103 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.26-201ENST00000362539 101 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-212P-201ENST00000362642 104 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-1285P-201ENST00000363480 105 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.257-201ENST00000364596 102 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.552-201ENST00000384665 112 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RNA5SP213-201ENST00000391031 106 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 MRPL35P1-201ENST00000404272 572 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RPS26P42-201ENST00000413485 326 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 CYCSP48-201ENST00000417124 323 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 PTGES3P4-201ENST00000426243 356 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AL358075.3-201ENST00000426289 226 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RPL39P29-201ENST00000447779 157 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 U8.22-201ENST00000459141 133 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RPL39P38-201ENST00000467018 153 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AC093663.1-201ENST00000497190 394 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-567P-201ENST00000516746 107 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AC022868.1-201ENST00000517767 391 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 IGKV2-26-201ENST00000518305 343 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AP000867.2-201ENST00000532468 320 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AC005357.1-201ENST00000588399 301 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 AC006111.3-201ENST00000622137 383 ntBASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RUFY4Q6ZNE9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 Y_RNA.319-201ENST00000365138 92 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 U8.10-201ENST00000384260 133 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-541P-201ENST00000384709 110 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-19P-201ENST00000384718 107 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 RNA5SP38-201ENST00000410750 119 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 AC023141.4-201ENST00000412031 328 ntBASIC3.86□□□□□ -1.79
RUFY4Q6ZNE9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 234.8 ms