Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SAMD1Q6SPF0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SAMD1Q6SPF0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SAMD1Q6SPF0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SAMD1Q6SPF0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.32□□□□□ -1.4
SAMD1Q6SPF0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 RNA5SP183-201ENST00000362452 119 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 Y_RNA.316-201ENST00000365118 111 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 Y_RNA.467-201ENST00000384297 102 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 MIR105-1-201ENST00000385222 81 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 AL590762.4-201ENST00000425885 253 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 RPL7AP28-201ENST00000464513 571 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 Y_RNA.773-201ENST00000607168 90 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 AC004656.1-201ENST00000568479 4951 ntBASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.31□□□□□ -1.4
SAMD1Q6SPF0 AC112198.2-201ENST00000426589 6996 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 Y_RNA.95-201ENST00000363079 95 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 RNU4-67P-201ENST00000364569 141 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 RNU1-106P-201ENST00000384382 164 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 MIR765-201ENST00000390226 114 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 MIR550A3-201ENST00000390735 95 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 RNA5SP241-201ENST00000391326 114 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 AC007161.1-204ENST00000423039 460 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 AC010099.1-201ENST00000455434 375 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 Y_RNA.659-201ENST00000515994 113 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 RNU6-948P-201ENST00000516374 107 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 MIR4436B2-201ENST00000581415 91 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 MIR4436B1-201ENST00000583272 91 ntBASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SAMD1Q6SPF0 SALL4P2-201ENST00000423288 2910 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 AC007656.2-201ENST00000624902 4547 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 RN7SKP156-201ENST00000410308 342 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 snoU13.20-201ENST00000459180 104 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 MIR3683-201ENST00000580847 82 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 RN7SL708P-201ENST00000580952 299 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 MIR6810-201ENST00000622701 70 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 AC074101.1-201ENST00000637861 241 ntBASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SAMD1Q6SPF0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 Y_RNA.253-201ENST00000364562 112 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 GNG5P2-201ENST00000372054 207 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 AL645733.1-201ENST00000402250 217 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 RPL32P35-201ENST00000415214 394 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 TRAV8-5-201ENST00000537369 341 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 AC073413.2-201ENST00000604332 360 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 AC064859.1-201ENST00000624741 174 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 AC112200.1-201ENST00000625015 234 ntBASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.28□□□□□ -1.4
SAMD1Q6SPF0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 SNORD113.2-201ENST00000364166 89 ntBASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 SNORA7.2-201ENST00000364446 145 ntBASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 AC093162.1-201ENST00000419682 124 ntBASIC6.27□□□□□ -1.41
SAMD1Q6SPF0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms