Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUBP1P53384 PCAT14-202ENST00000627127 3935 ntBASIC5.2□□□□□ -1.58
NUBP1P53384 AP001273.1-201ENST00000624493 3152 ntBASIC5.2□□□□□ -1.58
NUBP1P53384 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NUBP1P53384 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NUBP1P53384 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUBP1P53384 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUBP1P53384 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUBP1P53384 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUBP1P53384 AC083899.1-201ENST00000454465 3819 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 AC080128.1-201ENST00000474389 1917 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 AL592182.3-201ENST00000642132 3304 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUBP1P53384 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.19□□□□□ -1.58
NUBP1P53384 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NUBP1P53384 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NUBP1P53384 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.19□□□□□ -1.58
NUBP1P53384 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.19□□□□□ -1.58
NUBP1P53384 AC099677.2-201ENST00000436385 175 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 snoU13.29-201ENST00000459370 104 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 SNORA4.4-201ENST00000515921 135 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 RNU2-58P-201ENST00000516403 183 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 AC007224.1-201ENST00000564410 144 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 MIR3683-201ENST00000580847 82 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 AC073413.2-201ENST00000604332 360 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 AL133481.2-203ENST00000607558 139 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.19□□□□□ -1.58
NUBP1P53384 AL672167.1-204ENST00000641875 3017 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 AC010733.2-201ENST00000589496 5702 ntBASIC5.19□□□□□ -1.58
NUBP1P53384 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUBP1P53384 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUBP1P53384 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.19□□□□□ -1.58
NUBP1P53384 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUBP1P53384 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
NUBP1P53384 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.18□□□□□ -1.58
NUBP1P53384 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 RNA5SP90-201ENST00000364801 99 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 SNORD116-22-201ENST00000384430 92 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 AC004941.2-201ENST00000427009 228 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 AC009238.1-201ENST00000442165 424 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 RPL34P20-201ENST00000442771 351 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 AC009237.6-201ENST00000446969 424 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 RNA5SP57-201ENST00000459463 123 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 SNORD125-201ENST00000459538 96 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 SCGB1D5P-201ENST00000515134 247 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 RNA5SP43-201ENST00000516559 110 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.18□□□□□ -1.58
NUBP1P53384 AC022523.2-201ENST00000561045 150 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.18□□□□□ -1.58
NUBP1P53384 AC090115.4-201ENST00000609970 188 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 MIR4662A-201ENST00000637499 67 ntBASIC5.18□□□□□ -1.58
NUBP1P53384 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUBP1P53384 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUBP1P53384 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
NUBP1P53384 AC018630.2-201ENST00000534866 2403 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUBP1P53384 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUBP1P53384 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUBP1P53384 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
NUBP1P53384 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.17□□□□□ -1.58
NUBP1P53384 RN7SKP145-201ENST00000363291 303 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 SNORA33-201ENST00000363664 130 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNU6-675P-201ENST00000384236 104 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNU6-24P-201ENST00000384440 107 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNU6-1274P-201ENST00000384557 107 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 Y_RNA.531-201ENST00000384589 121 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 MIR129-1-201ENST00000384972 72 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNU6-644P-201ENST00000391155 98 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 MIR548O-201ENST00000408583 114 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 AC012671.1-201ENST00000451912 203 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNU6-857P-201ENST00000515893 110 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNA5SP112-201ENST00000515937 99 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNU6-513P-201ENST00000516104 104 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 RNU6-162P-201ENST00000516228 103 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 MIR4694-201ENST00000578534 80 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 MIR4765-201ENST00000585007 77 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 DLEU2_5.2-201ENST00000610606 84 ntBASIC5.17□□□□□ -1.58
NUBP1P53384 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUBP1P53384 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUBP1P53384 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NUBP1P53384 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.17□□□□□ -1.58
NUBP1P53384 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUBP1P53384 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUBP1P53384 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.16□□□□□ -1.58
NUBP1P53384 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NUBP1P53384 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms