Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC023050.2-201ENST00000544968 387 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 MIR4636-201ENST00000582271 80 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AL138889.2-201ENST00000603883 242 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AL022154.1-201ENST00000604698 785 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COL4A5P29400 RMST_4.1-201ENST00000616886 107 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.76□□□□□ -2.29
COL4A5P29400 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
COL4A5P29400 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.75□□□□□ -2.29
COL4A5P29400 RNU6-438P-201ENST00000365561 103 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 RNU6-338P-201ENST00000383888 105 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A5P29400 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A5P29400 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A5P29400 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL4A5P29400 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A5P29400 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A5P29400 AL353752.1-201ENST00000454946 260 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 RNU6-229P-201ENST00000516614 102 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 RNU6-914P-201ENST00000516749 109 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 RAB11AP2-201ENST00000545905 639 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 MIR5692A1-201ENST00000580523 69 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
COL4A5P29400 RNU6-212P-201ENST00000362642 104 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 RNU6-527P-201ENST00000363425 104 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 RNU6-271P-201ENST00000363858 105 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 MIR618-201ENST00000385287 98 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 MTCYBP5-201ENST00000423752 1135 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.75□□□□□ -2.29
COL4A5P29400 AL591043.1-201ENST00000432461 424 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AL135790.2-201ENST00000437701 267 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 PTENP1-201ENST00000447117 1215 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A5P29400 AC087477.1-201ENST00000465747 340 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AC079140.3-201ENST00000511111 550 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.75□□□□□ -2.29
COL4A5P29400 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.75□□□□□ -2.29
COL4A5P29400 CYP4A27P-201ENST00000567218 190 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AC007363.1-201ENST00000604736 620 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 AL158211.2-201ENST00000607282 395 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 Z82243.1-201ENST00000609432 473 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 SCARNA4-202ENST00000625402 129 ntBASIC0.75□□□□□ -2.29
COL4A5P29400 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
COL4A5P29400 RNU6-26P-201ENST00000383985 107 ntBASIC0.74□□□□□ -2.29
COL4A5P29400 RNU6-72P-201ENST00000384285 79 ntBASIC0.74□□□□□ -2.29
COL4A5P29400 RPL23AP32-201ENST00000395315 459 ntBASIC0.74□□□□□ -2.29
COL4A5P29400 AC019070.1-201ENST00000415008 1024 ntBASIC0.74□□□□□ -2.29
COL4A5P29400 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
COL4A5P29400 AC021146.2-201ENST00000504736 556 ntBASIC0.74□□□□□ -2.29
COL4A5P29400 RNU6-201P-201ENST00000517100 61 ntBASIC0.74□□□□□ -2.29
COL4A5P29400 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.74□□□□□ -2.29
COL4A5P29400 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.74□□□□□ -2.29
COL4A5P29400 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.74□□□□□ -2.29
COL4A5P29400 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.74□□□□□ -2.29
COL4A5P29400 AL391001.1-201ENST00000602747 715 ntBASIC0.74□□□□□ -2.29
COL4A5P29400 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
COL4A5P29400 Y_RNA.132-201ENST00000363421 102 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 RNU6-621P-201ENST00000364752 109 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.73□□□□□ -2.29
COL4A5P29400 MIR544A-201ENST00000384855 91 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 MIR597-201ENST00000384968 97 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 MIR1265-201ENST00000408444 86 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 MIR1912-201ENST00000410389 80 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 RNA5SP111-201ENST00000411386 101 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 AL353777.1-201ENST00000425552 326 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A5P29400 snoU109.3-201ENST00000459477 145 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 HMGN1P10-201ENST00000474557 553 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.73□□□□□ -2.29
COL4A5P29400 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A5P29400 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.73□□□□□ -2.29
COL4A5P29400 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.73□□□□□ -2.29
COL4A5P29400 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A5P29400 RNU5F-2P-201ENST00000516066 82 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 AC109446.1-201ENST00000566172 220 ntBASIC0.73□□□□□ -2.29
COL4A5P29400 Y_RNA.192-201ENST00000363977 102 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 RNU4-56P-201ENST00000364700 142 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 SNORA48.1-201ENST00000390879 135 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A5P29400 MRPL35P3-201ENST00000421557 364 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.72□□□□□ -2.29
COL4A5P29400 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL4A5P29400 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC099513.1-201ENST00000490423 301 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 RNU6-1003P-201ENST00000517099 105 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC091163.3-201ENST00000518269 1144 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.72□□□□□ -2.29
COL4A5P29400 AC005668.1-201ENST00000571142 476 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC022022.2-201ENST00000602989 360 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC112187.2-201ENST00000604345 283 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.72□□□□□ -2.29
COL4A5P29400 AC063943.3-201ENST00000615562 356 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 MIR1248-201ENST00000629190 106 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 LINC02555-201ENST00000563933 1951 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL4A5P29400 RNU6-1222P-201ENST00000384615 107 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 RNU6-1179P-201ENST00000384667 107 ntBASIC0.72□□□□□ -2.29
COL4A5P29400 RNU6-1000P-201ENST00000391066 106 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms