Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-23P-201ENST00000363283 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-11P-201ENST00000364234 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-715P-201ENST00000365204 103 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-25P-201ENST00000383873 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-1-201ENST00000383898 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-48P-201ENST00000384161 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-36P-201ENST00000384172 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-4P-201ENST00000384205 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-5P-201ENST00000384238 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-3P-201ENST00000384314 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-16P-201ENST00000384385 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-15P-201ENST00000384534 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-2-201ENST00000384627 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-29P-201ENST00000384637 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-9-201ENST00000384776 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-33P-201ENST00000384793 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 MIR29B2-201ENST00000385055 81 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CHMP2AO43633 SNORA12-201ENST00000391162 147 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 OR6C66P-201ENST00000414917 930 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
CHMP2AO43633 Z99497.1-201ENST00000421282 135 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 AL669831.1-202ENST00000428504 417 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.46□□□□□ -2.18
CHMP2AO43633 GTF2IP13-201ENST00000438487 386 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 AC007969.2-201ENST00000441891 191 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 AC010409.1-201ENST00000487382 476 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 AC005840.1-201ENST00000498412 377 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.46□□□□□ -2.18
CHMP2AO43633 SNORA31.17-201ENST00000516953 127 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.46□□□□□ -2.18
CHMP2AO43633 AC018630.3-201ENST00000542637 96 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.46□□□□□ -2.18
CHMP2AO43633 RNU6-6P-201ENST00000606623 107 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 MIR98-201ENST00000606724 119 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.46□□□□□ -2.18
CHMP2AO43633 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.46□□□□□ -2.18
CHMP2AO43633 AC245060.5-201ENST00000610778 3293 ntBASIC1.46□□□□□ -2.18
CHMP2AO43633 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHMP2AO43633 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CHMP2AO43633 OR4G2P-201ENST00000328113 903 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 RNU1-62P-201ENST00000362599 164 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 Y_RNA.99-201ENST00000363138 105 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 RNY1P12-201ENST00000364251 105 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 SNORA40.6-201ENST00000391153 128 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHMP2AO43633 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.45□□□□□ -2.18
CHMP2AO43633 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.45□□□□□ -2.18
CHMP2AO43633 snoU13.14-201ENST00000459372 104 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.45□□□□□ -2.18
CHMP2AO43633 RNU6-1178P-201ENST00000516674 107 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.45□□□□□ -2.18
CHMP2AO43633 AC087883.1-201ENST00000551882 391 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.45□□□□□ -2.18
CHMP2AO43633 AC064872.1-201ENST00000604823 1072 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 AL590240.4-201ENST00000616908 390 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 AL159153.1-201ENST00000619688 317 ntBASIC1.45□□□□□ -2.18
CHMP2AO43633 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHMP2AO43633 CBX3P1-201ENST00000325243 554 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CHMP2AO43633 RNU6-428P-201ENST00000362942 107 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 RNA5SP493-201ENST00000364115 91 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 RNU6-45P-201ENST00000384471 107 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 MIR544A-201ENST00000384855 91 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 RNU6-321P-201ENST00000410912 106 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 RNU6-607P-201ENST00000411283 108 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 RPS15AP10-201ENST00000432472 382 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.44□□□□□ -2.18
CHMP2AO43633 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CHMP2AO43633 SNRPGP9-201ENST00000456025 225 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.44□□□□□ -2.18
CHMP2AO43633 SNRPGP7-201ENST00000469016 106 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 SNORA18.6-201ENST00000516792 115 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.44□□□□□ -2.18
CHMP2AO43633 AC137800.2-201ENST00000574375 120 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.44□□□□□ -2.18
CHMP2AO43633 AL590229.1-201ENST00000603497 542 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 MIR8074-201ENST00000615081 81 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 AC091304.6-201ENST00000619761 202 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 AC136475.10-201ENST00000620253 385 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 SCARNA4-202ENST00000625402 129 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 AC008993.2-201ENST00000631744 806 ntBASIC1.44□□□□□ -2.18
CHMP2AO43633 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CHMP2AO43633 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.44□□□□□ -2.18
CHMP2AO43633 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHMP2AO43633 U3.4-201ENST00000363352 213 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 RNU6-1029P-201ENST00000384109 107 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 RNA5SP390-201ENST00000410191 113 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 RNU6-248P-201ENST00000410720 107 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 MTND3P17-201ENST00000416968 344 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 NCOR1P3-201ENST00000420479 303 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.43□□□□□ -2.18
CHMP2AO43633 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.43□□□□□ -2.18
CHMP2AO43633 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.43□□□□□ -2.18
CHMP2AO43633 RPL39P29-201ENST00000447779 157 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 AC079448.1-201ENST00000449377 373 ntBASIC1.43□□□□□ -2.18
CHMP2AO43633 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
CHMP2AO43633 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms