Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.7□□□□□ -1.82
RFXAPO00287 AK6P2-201ENST00000549020 471 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 MIR4512-201ENST00000583257 77 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 MIR4276-201ENST00000584832 70 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 AC104984.5-201ENST00000586878 94 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 U4.7-201ENST00000638126 106 ntBASIC3.7□□□□□ -1.82
RFXAPO00287 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFXAPO00287 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFXAPO00287 UBE3AP2-201ENST00000429033 2259 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFXAPO00287 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
RFXAPO00287 RNU6-626P-201ENST00000363354 107 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 Y_RNA.215-201ENST00000364204 112 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 Y_RNA.217-201ENST00000364214 105 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 RNU4-56P-201ENST00000364700 142 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 RNU6-1175P-201ENST00000365200 107 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 RNU5E-7P-201ENST00000365290 117 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 Y_RNA.343-201ENST00000365354 112 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 RNU6-968P-201ENST00000384076 107 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 MIR3074-201ENST00000384885 81 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 SNORA48.8-201ENST00000391324 134 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 AL357139.1-201ENST00000407792 426 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 SAGE2P-201ENST00000420011 2126 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 TOMM20P4-201ENST00000427861 435 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.69□□□□□ -1.82
RFXAPO00287 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.69□□□□□ -1.82
RFXAPO00287 Y_RNA.641-201ENST00000459414 105 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.69□□□□□ -1.82
RFXAPO00287 RNU6-572P-201ENST00000516724 80 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.69□□□□□ -1.82
RFXAPO00287 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.69□□□□□ -1.82
RFXAPO00287 RPL12P50-201ENST00000603116 116 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 MTND1P7-201ENST00000632801 297 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 AC241585.2-209ENST00000638217 143 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFXAPO00287 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFXAPO00287 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.69□□□□□ -1.82
RFXAPO00287 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFXAPO00287 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RFXAPO00287 AC116096.1-201ENST00000566804 2314 ntBASIC3.69□□□□□ -1.82
RFXAPO00287 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 AL356489.2-201ENST00000566968 3528 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RFXAPO00287 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 Y_RNA.400-201ENST00000383963 111 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 RNU1-89P-201ENST00000384592 164 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 MIR569-201ENST00000385228 96 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 RNU1-139P-201ENST00000391307 165 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.68□□□□□ -1.82
RFXAPO00287 AL353705.4-201ENST00000449661 238 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.68□□□□□ -1.82
RFXAPO00287 AC092798.1-201ENST00000458542 409 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 AC117440.1-201ENST00000474107 571 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 RPL23AP49-201ENST00000492925 468 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.68□□□□□ -1.82
RFXAPO00287 RNU6-1114P-201ENST00000516022 107 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 RNU6-1256P-201ENST00000516539 103 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.68□□□□□ -1.82
RFXAPO00287 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.68□□□□□ -1.82
RFXAPO00287 MIR5695-201ENST00000579717 85 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 MIR3145-201ENST00000580727 82 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.68□□□□□ -1.82
RFXAPO00287 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 AL357075.2-201ENST00000614906 189 ntBASIC3.68□□□□□ -1.82
RFXAPO00287 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.68□□□□□ -1.82
RFXAPO00287 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.68□□□□□ -1.82
RFXAPO00287 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFXAPO00287 Z83843.1-201ENST00000604070 3685 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFXAPO00287 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFXAPO00287 Y_RNA.136-201ENST00000363444 102 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 RNA5SP322-201ENST00000363617 119 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 RNU6-105P-201ENST00000363909 104 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 Y_RNA.353-201ENST00000365440 108 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 RNU6-449P-201ENST00000383914 107 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 Y_RNA.412-201ENST00000384001 104 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 RNU6-629P-201ENST00000384061 103 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 Y_RNA.571-201ENST00000384753 98 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 MIR10B-201ENST00000385011 110 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 BTF3L4P2-201ENST00000392798 346 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 RNU5A-5P-201ENST00000411054 116 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 AC096638.1-201ENST00000444678 216 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.67□□□□□ -1.82
RFXAPO00287 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.67□□□□□ -1.82
RFXAPO00287 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.67□□□□□ -1.82
RFXAPO00287 AC110741.2-201ENST00000605278 268 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 AC004825.2-201ENST00000616634 455 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 BMS1P21-201ENST00000634565 365 ntBASIC3.67□□□□□ -1.82
RFXAPO00287 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
RFXAPO00287 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms