Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 RN7SL354P-201ENST00000469282 294 ntBASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 RNA5SP153-201ENST00000516498 76 ntBASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 RNU7-116P-201ENST00000516940 62 ntBASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 AL442128.1-201ENST00000615151 90 ntBASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 LINC01355-201ENST00000566551 5444 ntBASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB3Q9Y5E6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 AC007256.1-201ENST00000392253 2765 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 AC079741.1-201ENST00000321498 212 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 SNORA70.10-201ENST00000384515 134 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 RNU6-440P-201ENST00000390882 105 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 RNU6-592P-201ENST00000411333 103 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 HMGN2P20-201ENST00000437531 273 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 AL021397.1-201ENST00000451806 248 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 RN7SL385P-201ENST00000468873 276 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 MIR4284-201ENST00000578924 81 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 AC025521.1-201ENST00000621624 286 ntBASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHB3Q9Y5E6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 RNU4-15P-201ENST00000362613 141 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 Y_RNA.91-201ENST00000363042 107 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 MIR124-3-201ENST00000384866 87 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 MIR873-201ENST00000401120 77 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 RNU2-70P-201ENST00000410718 179 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 RN7SKP100-201ENST00000411258 284 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 AC010618.1-201ENST00000469924 477 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 RNA5SP360-201ENST00000516555 118 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 AC105137.2-201ENST00000569073 466 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 AC097639.2-201ENST00000603159 172 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 AC019206.1-201ENST00000621938 425 ntBASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHB3Q9Y5E6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 Y_RNA.634-201ENST00000364811 113 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 Y_RNA.544-201ENST00000384650 113 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 MIR570-201ENST00000384917 97 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 MIR891A-201ENST00000401237 79 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 IGLV2-34-201ENST00000490007 283 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 RPL36AP21-201ENST00000490372 323 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 RNA5SP281-201ENST00000516504 135 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 AC025647.1-201ENST00000517879 253 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 AC005972.2-201ENST00000604690 348 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 LINC00901.1-201ENST00000617252 152 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 OR51H2P-202ENST00000641424 3046 ntBASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PCDHB3Q9Y5E6 OR14L1P-202ENST00000641545 3009 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AL159152.1-201ENST00000635019 2587 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 AL592182.3-201ENST00000642132 3304 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 Y_RNA.40-201ENST00000362645 93 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 RNU1-83P-201ENST00000363426 164 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 RNA5SP505-201ENST00000364748 108 ntBASIC4.67□□□□□ -1.66
PCDHB3Q9Y5E6 RNU6-1014P-201ENST00000383940 103 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms