Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MS4A4AQ96JQ5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
MS4A4AQ96JQ5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MS4A4AQ96JQ5 CPHL1P-201ENST00000461341 3407 ntBASIC5.23□□□□□ -1.57
MS4A4AQ96JQ5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
MS4A4AQ96JQ5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
MS4A4AQ96JQ5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MIR562-201ENST00000384894 95 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MIR590-201ENST00000385008 97 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MIR1283-1-201ENST00000408494 87 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 RNU6-628P-201ENST00000410675 107 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 RNU6-592P-201ENST00000411333 103 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 AC245291.1-201ENST00000419501 328 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 AL117339.2-201ENST00000430475 180 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 AL591623.2-201ENST00000449978 222 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 RNU6-221P-201ENST00000459541 99 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 RNU6-63P-201ENST00000516690 95 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MIR5009-201ENST00000578736 100 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 uc_338.13-201ENST00000618243 179 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MALAT1.1-201ENST00000618249 95 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MIR6891-201ENST00000618788 93 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 AC002064.3-201ENST00000623448 346 ntBASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
MS4A4AQ96JQ5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
MS4A4AQ96JQ5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
MS4A4AQ96JQ5 AP002512.4-202ENST00000641599 4530 ntBASIC5.21□□□□□ -1.57
MS4A4AQ96JQ5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MS4A4AQ96JQ5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 Y_RNA.198-201ENST00000364013 98 ntBASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 Y_RNA.213-201ENST00000364178 111 ntBASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 RNU1-57P-201ENST00000384491 166 ntBASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 SNORA11F-201ENST00000408237 128 ntBASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 RNA5SP129-201ENST00000410276 118 ntBASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 AC018634.1-201ENST00000437554 401 ntBASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 HMGN2P15-201ENST00000585707 270 ntBASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.21□□□□□ -1.58
MS4A4AQ96JQ5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 Y_RNA.66-201ENST00000362862 102 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 MIR181B1-201ENST00000385240 110 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 RNU11-201ENST00000387069 134 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 AC078817.1-201ENST00000492623 435 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 RN7SL691P-201ENST00000494487 301 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 RNU6-109P-201ENST00000516364 107 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 RNU6-184P-201ENST00000516514 107 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 MIR3129-201ENST00000581095 76 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 AL360012.1-201ENST00000602813 131 ntBASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MS4A4AQ96JQ5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 AL136164.3-201ENST00000624429 3978 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 AC009487.4-201ENST00000624969 3585 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 MIR208A-201ENST00000362287 71 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 snoU2_19.1-201ENST00000362361 80 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 RNU6-1134P-201ENST00000365156 101 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 Y_RNA.486-201ENST00000384398 107 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 RNA5SP354-201ENST00000391247 136 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 AL031121.1-201ENST00000406553 254 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 RPL23AP52-201ENST00000439311 478 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 AC093663.1-201ENST00000497190 394 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 JPX_2.1-201ENST00000614161 69 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 MIR6075-201ENST00000620782 95 ntBASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MS4A4AQ96JQ5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms