Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM48Q8IWZ4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 RNA5SP119-201ENST00000362715 117 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 MIR10B-201ENST00000385011 110 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 Y_RNA.581-201ENST00000391017 97 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AL133475.1-201ENST00000404414 305 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 MIR548I3-201ENST00000408378 149 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 MIR548I1-201ENST00000408810 149 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 RPL23AP82-202ENST00000427528 469 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AC096638.1-201ENST00000444678 216 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 CYCSP35-201ENST00000451978 304 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 SUMO1P2-201ENST00000452524 304 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AC016632.1-201ENST00000503994 196 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 MIR5571-201ENST00000577998 113 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AL356157.2-201ENST00000605122 111 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AP003355.3-201ENST00000623465 114 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 MIR3529-201ENST00000637713 78 ntBASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM48Q8IWZ4 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 SNORD81.1-201ENST00000363064 77 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 RNA5SP50-201ENST00000363731 107 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-200P-201ENST00000364743 107 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 SNORA1.3-201ENST00000384676 136 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-1001P-201ENST00000411265 100 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 AL161651.1-201ENST00000440882 223 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 AP000705.1-201ENST00000454567 350 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 GZMAP1-201ENST00000503054 631 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-496P-201ENST00000516145 99 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-58P-201ENST00000517143 103 ntBASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM48Q8IWZ4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 MAPK10-372ENST00000641954 3413 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-1266P-201ENST00000362794 105 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 Y_RNA.352-201ENST00000365439 102 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-281P-201ENST00000384212 103 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 Y_RNA.462-201ENST00000384268 102 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 MIR549A-201ENST00000385268 96 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 RNU4-30P-201ENST00000410245 143 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 AC023141.4-201ENST00000412031 328 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 AC244670.1-201ENST00000436879 112 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 RPL30P14-201ENST00000482744 348 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 SNORA31.6-201ENST00000516241 130 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 RNA5SP309-201ENST00000516670 106 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 KLKP1-201ENST00000595979 403 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 uc_338.32-201ENST00000615087 172 ntBASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM48Q8IWZ4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 SNORA63.1-201ENST00000362493 131 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 Y_RNA.269-201ENST00000364685 89 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 Y_RNA.286-201ENST00000364813 102 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 RNU6-159P-201ENST00000391080 106 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 RN7SKP61-201ENST00000410642 295 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC019205.3-201ENST00000424573 156 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC002075.2-201ENST00000425207 252 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 CYCSP4-201ENST00000429682 331 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 AC005002.2-201ENST00000438228 269 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 MTND2P29-201ENST00000438595 412 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 SUMO1P3-201ENST00000439961 304 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 HSPE1P25-201ENST00000455484 251 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 RN7SKP83-201ENST00000516512 178 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 SNORA70.18-201ENST00000516696 98 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 SNORA31.16-201ENST00000516773 139 ntBASIC3.48□□□□□ -1.85
TRIM48Q8IWZ4 CKS1BP7-201ENST00000522230 235 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms