Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AP001025.1-201ENST00000486139 332 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-397P-201ENST00000516226 104 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 ACA59.2-201ENST00000517061 156 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 AP003733.2-201ENST00000529409 171 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 SNORA43.4-201ENST00000629559 138 ntBASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RUFY4Q6ZNE9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 Y_RNA.64-201ENST00000362845 102 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-283P-201ENST00000364788 107 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 RNU1-140P-201ENST00000365040 165 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 Y_RNA.350-201ENST00000365409 98 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 Y_RNA.439-201ENST00000384119 94 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-708P-201ENST00000384217 107 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 U3.19-201ENST00000390893 196 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 RNU1-139P-201ENST00000391307 165 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AC005326.1-201ENST00000429197 123 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AL161651.1-201ENST00000440882 223 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 LINC01399-202ENST00000458450 244 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-1132P-201ENST00000459214 107 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 TOMM22P6-201ENST00000465035 409 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AC087477.1-201ENST00000465747 340 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AF186996.7-201ENST00000492781 209 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AC007375.1-201ENST00000554513 578 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 HMGN2P15-201ENST00000585707 270 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 KLKP1-201ENST00000595979 403 ntBASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.92□□□□□ -1.78
RUFY4Q6ZNE9 AL136164.4-201ENST00000625013 2135 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 Y_RNA.447-201ENST00000384184 113 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-622P-201ENST00000384272 103 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 MIR32-201ENST00000384965 70 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 SNORD78.2-201ENST00000391076 69 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-130P-201ENST00000411112 103 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AC006989.1-201ENST00000427212 131 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AC115115.1-201ENST00000449927 248 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AL136097.1-201ENST00000456945 913 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AC091874.1-201ENST00000511402 339 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 RN7SKP57-201ENST00000517248 293 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 HSPE1P4-201ENST00000550617 308 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AC021231.3-201ENST00000558497 370 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 AC090897.2-201ENST00000581715 130 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 Y_RNA.772-201ENST00000606692 102 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 RNU6-91P-201ENST00000607774 107 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 U6.92-201ENST00000636464 89 ntBASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RUFY4Q6ZNE9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.9□□□□□ -1.78
RUFY4Q6ZNE9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
RUFY4Q6ZNE9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
RUFY4Q6ZNE9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RUFY4Q6ZNE9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RUFY4Q6ZNE9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RUFY4Q6ZNE9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC010615.1-201ENST00000594254 1764 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 SNORA38.1-201ENST00000364172 131 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 MT-TW-201ENST00000387382 68 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 RNA5SP120-201ENST00000410900 112 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC139712.2-201ENST00000424302 339 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 RPS4XP22-201ENST00000480755 780 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC010469.2-201ENST00000496412 480 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-1114P-201ENST00000516022 107 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 RNU2-27P-201ENST00000516185 142 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 SNORA70.14-201ENST00000516205 110 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 RNU5B-3P-201ENST00000516601 115 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 RNU6-1012P-201ENST00000516606 109 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC115990.1-201ENST00000526957 301 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC093023.1-201ENST00000547375 507 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AL138963.2-201ENST00000605137 226 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 MIR7153-201ENST00000637758 57 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 AC002543.1-201ENST00000299783 1954 ntBASIC3.9□□□□□ -1.79
RUFY4Q6ZNE9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms