Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL357094.1-201ENST00000603845 844 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
PRKDCP78527 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.06□□□□□ -2.42
PRKDCP78527 RNU6-31P-201ENST00000384388 108 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.06□□□□□ -2.42
PRKDCP78527 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.06□□□□□ -2.42
PRKDCP78527 AC104651.1-201ENST00000427559 735 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC010469.2-201ENST00000496412 480 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 TRAV32-201ENST00000553993 340 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AL158211.4-201ENST00000606988 584 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
PRKDCP78527 RNU4-48P-201ENST00000365559 182 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 RNU7-159P-201ENST00000459284 62 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 MIR3664-201ENST00000579074 99 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC034229.4-201ENST00000607861 441 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 uc_338.34-201ENST00000617467 174 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 PTGES3P1-201ENST00000439531 483 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 NFU1P2-201ENST00000448700 469 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC012308.1-201ENST00000451232 178 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC116655.1-201ENST00000508324 901 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.06□□□□□ -2.42
PRKDCP78527 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.06□□□□□ -2.42
PRKDCP78527 MIR8064-201ENST00000612863 90 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC107075.1-201ENST00000613695 314 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.06□□□□□ -2.42
PRKDCP78527 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.06□□□□□ -2.42
PRKDCP78527 OR5AK4P-201ENST00000635912 903 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 MTND5P32-201ENST00000560711 1802 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
PRKDCP78527 MIR518A1-201ENST00000385068 85 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 RNU2-48P-201ENST00000410694 191 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 RNA5SP222-201ENST00000411039 105 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AC123900.1-201ENST00000420390 96 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AC073261.1-201ENST00000429409 121 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AC002350.1-201ENST00000490759 375 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 RNU6-581P-201ENST00000516214 105 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 SNORA76.2-201ENST00000517095 137 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AL355297.3-201ENST00000604082 446 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.07□□□□□ -2.42
PRKDCP78527 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
PRKDCP78527 SNORD18A-201ENST00000363753 72 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 RNU6-674P-201ENST00000363831 107 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 RNA5SP219-201ENST00000390940 113 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 TXNL1P1-201ENST00000429528 554 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.07□□□□□ -2.42
PRKDCP78527 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.07□□□□□ -2.42
PRKDCP78527 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.07□□□□□ -2.42
PRKDCP78527 AC121334.2-201ENST00000605387 271 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AC093788.1-201ENST00000609356 927 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AC009269.6-201ENST00000621778 588 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AL451046.2-201ENST00000403074 277 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AL353691.1-201ENST00000451332 387 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.07□□□□□ -2.42
PRKDCP78527 AC008088.1-201ENST00000580993 280 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 AP001981.2-201ENST00000603241 418 ntBASIC-0.07□□□□□ -2.42
PRKDCP78527 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 BTF3P15-201ENST00000455606 336 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 RNU6-965P-201ENST00000516721 96 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.08□□□□□ -2.42
PRKDCP78527 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.08□□□□□ -2.42
PRKDCP78527 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.08□□□□□ -2.42
PRKDCP78527 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.08□□□□□ -2.42
PRKDCP78527 SNORA32.1-201ENST00000364514 115 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AC130509.1-201ENST00000464158 433 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AC021146.9-201ENST00000512503 156 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.08□□□□□ -2.42
PRKDCP78527 MIR3169-201ENST00000578032 83 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 VN1R83P-201ENST00000595685 445 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
PRKDCP78527 AL606662.1-201ENST00000445763 553 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AC024589.1-201ENST00000512207 263 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.08□□□□□ -2.42
PRKDCP78527 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.08□□□□□ -2.42
PRKDCP78527 AC005951.2-201ENST00000576282 495 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AL513534.2-201ENST00000603836 250 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.08□□□□□ -2.42
PRKDCP78527 AC011374.2-201ENST00000607135 526 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 AL353149.1-201ENST00000610667 244 ntBASIC-0.08□□□□□ -2.42
PRKDCP78527 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
PRKDCP78527 MTCO2P34-201ENST00000421994 607 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.09□□□□□ -2.42
PRKDCP78527 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.09□□□□□ -2.42
PRKDCP78527 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 CENPUP1-201ENST00000526649 1202 ntBASIC-0.09□□□□□ -2.42
PRKDCP78527 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.09□□□□□ -2.42
PRKDCP78527 RNU4-5P-201ENST00000607255 135 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms