Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP46P62068 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP46P62068 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.73□□□□□ -1.65
USP46P62068 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP46P62068 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.73□□□□□ -1.65
USP46P62068 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.73□□□□□ -1.65
USP46P62068 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
USP46P62068 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
USP46P62068 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP46P62068 SNORD114-19-201ENST00000363072 75 ntBASIC4.72□□□□□ -1.65
USP46P62068 SNORA25.7-201ENST00000364375 127 ntBASIC4.72□□□□□ -1.65
USP46P62068 RNU6-1082P-201ENST00000364574 107 ntBASIC4.72□□□□□ -1.65
USP46P62068 RNA5SP167-201ENST00000365461 116 ntBASIC4.72□□□□□ -1.65
USP46P62068 RNU6-748P-201ENST00000384648 107 ntBASIC4.72□□□□□ -1.65
USP46P62068 MIR548B-201ENST00000385247 97 ntBASIC4.72□□□□□ -1.65
USP46P62068 RNA5SP372-201ENST00000390836 115 ntBASIC4.72□□□□□ -1.65
USP46P62068 AC069285.2-201ENST00000440210 275 ntBASIC4.72□□□□□ -1.65
USP46P62068 snoU13.28-201ENST00000459235 104 ntBASIC4.72□□□□□ -1.65
USP46P62068 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.72□□□□□ -1.65
USP46P62068 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.72□□□□□ -1.65
USP46P62068 HIGD1AP1-201ENST00000550979 275 ntBASIC4.72□□□□□ -1.65
USP46P62068 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP46P62068 AC091152.3-201ENST00000604227 325 ntBASIC4.72□□□□□ -1.65
USP46P62068 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP46P62068 MIR548AY-201ENST00000617669 107 ntBASIC4.72□□□□□ -1.65
USP46P62068 MIR6830-201ENST00000636015 70 ntBASIC4.72□□□□□ -1.65
USP46P62068 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
USP46P62068 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
USP46P62068 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.71□□□□□ -1.65
USP46P62068 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.71□□□□□ -1.65
USP46P62068 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
USP46P62068 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
USP46P62068 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.71□□□□□ -1.66
USP46P62068 MAPK10-320ENST00000641462 6696 ntBASIC4.71□□□□□ -1.66
USP46P62068 Y_RNA.361-201ENST00000365515 120 ntBASIC4.71□□□□□ -1.66
USP46P62068 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP46P62068 SNORA36B-201ENST00000410438 131 ntBASIC4.71□□□□□ -1.66
USP46P62068 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.71□□□□□ -1.66
USP46P62068 SNORA72.7-201ENST00000516349 94 ntBASIC4.71□□□□□ -1.66
USP46P62068 IGKV2D-19-201ENST00000523346 262 ntBASIC4.71□□□□□ -1.66
USP46P62068 MIR3690-201ENST00000580266 75 ntBASIC4.71□□□□□ -1.66
USP46P62068 AC005086.4-201ENST00000623065 213 ntBASIC4.71□□□□□ -1.66
USP46P62068 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
USP46P62068 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
USP46P62068 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP46P62068 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.71□□□□□ -1.66
USP46P62068 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.71□□□□□ -1.66
USP46P62068 MAPK10-303ENST00000641324 3959 ntBASIC4.71□□□□□ -1.66
USP46P62068 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.7□□□□□ -1.66
USP46P62068 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.7□□□□□ -1.66
USP46P62068 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.7□□□□□ -1.66
USP46P62068 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.7□□□□□ -1.66
USP46P62068 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP46P62068 RNU6-1010P-201ENST00000362757 107 ntBASIC4.7□□□□□ -1.66
USP46P62068 RNU6-1305P-201ENST00000364353 104 ntBASIC4.7□□□□□ -1.66
USP46P62068 SNORA67.2-201ENST00000384300 149 ntBASIC4.7□□□□□ -1.66
USP46P62068 MIR518C-201ENST00000384822 101 ntBASIC4.7□□□□□ -1.66
USP46P62068 SNORA79-201ENST00000408376 140 ntBASIC4.7□□□□□ -1.66
USP46P62068 Z74021.1-201ENST00000423610 407 ntBASIC4.7□□□□□ -1.66
USP46P62068 AIMP1P2-201ENST00000425294 312 ntBASIC4.7□□□□□ -1.66
USP46P62068 RPS29P17-201ENST00000430795 166 ntBASIC4.7□□□□□ -1.66
USP46P62068 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.7□□□□□ -1.66
USP46P62068 RPS4XP2-201ENST00000458402 793 ntBASIC4.7□□□□□ -1.66
USP46P62068 AP000873.1-201ENST00000463987 400 ntBASIC4.7□□□□□ -1.66
USP46P62068 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.7□□□□□ -1.66
USP46P62068 AC023141.12-201ENST00000512399 199 ntBASIC4.7□□□□□ -1.66
USP46P62068 AC015795.1-201ENST00000513669 327 ntBASIC4.7□□□□□ -1.66
USP46P62068 RNU6-772P-201ENST00000516042 105 ntBASIC4.7□□□□□ -1.66
USP46P62068 RNU6-589P-201ENST00000516485 107 ntBASIC4.7□□□□□ -1.66
USP46P62068 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP46P62068 MIR3609-201ENST00000582661 80 ntBASIC4.7□□□□□ -1.66
USP46P62068 AC120024.3-201ENST00000603167 156 ntBASIC4.7□□□□□ -1.66
USP46P62068 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.7□□□□□ -1.66
USP46P62068 MIR6891-201ENST00000618788 93 ntBASIC4.7□□□□□ -1.66
USP46P62068 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.7□□□□□ -1.66
USP46P62068 CENPCP1-201ENST00000533085 2578 ntBASIC4.7□□□□□ -1.66
USP46P62068 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
USP46P62068 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
USP46P62068 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
USP46P62068 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP46P62068 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP46P62068 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.69□□□□□ -1.66
USP46P62068 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.69□□□□□ -1.66
USP46P62068 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP46P62068 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
USP46P62068 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP46P62068 MIR448-201ENST00000362131 111 ntBASIC4.69□□□□□ -1.66
USP46P62068 SNORD45.3-201ENST00000363836 72 ntBASIC4.69□□□□□ -1.66
USP46P62068 RNU6-755P-201ENST00000364400 103 ntBASIC4.69□□□□□ -1.66
USP46P62068 RNA5SP267-201ENST00000364893 126 ntBASIC4.69□□□□□ -1.66
USP46P62068 RNY3P5-201ENST00000384127 102 ntBASIC4.69□□□□□ -1.66
USP46P62068 MIR147B-201ENST00000390185 80 ntBASIC4.69□□□□□ -1.66
USP46P62068 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP46P62068 AL591034.1-201ENST00000407447 340 ntBASIC4.69□□□□□ -1.66
USP46P62068 RNU4-43P-201ENST00000410628 137 ntBASIC4.69□□□□□ -1.66
USP46P62068 AC023141.4-201ENST00000412031 328 ntBASIC4.69□□□□□ -1.66
USP46P62068 RPL23AP82-202ENST00000427528 469 ntBASIC4.69□□□□□ -1.66
USP46P62068 AL445584.1-201ENST00000431451 330 ntBASIC4.69□□□□□ -1.66
USP46P62068 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.69□□□□□ -1.66
USP46P62068 AC012671.1-201ENST00000451912 203 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms