Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CYP2C59P-201ENST00000457790 269 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.41□□□□□ -2.02
LIMK1P53667 RNA5SP281-201ENST00000516504 135 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 SNORD60.2-201ENST00000516883 86 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 AC109329.1-201ENST00000518744 317 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.41□□□□□ -2.02
LIMK1P53667 AP000889.2-201ENST00000532684 490 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 AK6P1-201ENST00000540219 478 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 SNRPGP18-201ENST00000553000 214 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.41□□□□□ -2.02
LIMK1P53667 EIF1P4-201ENST00000572664 335 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.41□□□□□ -2.02
LIMK1P53667 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 DISC2.1-201ENST00000612827 205 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LIMK1P53667 AC090517.3-201ENST00000625170 141 ntBASIC2.41□□□□□ -2.02
LIMK1P53667 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.41□□□□□ -2.02
LIMK1P53667 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LIMK1P53667 AL596028.1-201ENST00000326971 197 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 Y_RNA.9-201ENST00000362354 101 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 RNU6-655P-201ENST00000362858 107 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 RNU6-428P-201ENST00000362942 107 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 RNU6-82P-201ENST00000363970 107 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 RNU6-827P-201ENST00000365553 106 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 Y_RNA.378-201ENST00000365652 113 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 RNU6-648P-201ENST00000410190 107 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.4□□□□□ -2.03
LIMK1P53667 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.4□□□□□ -2.03
LIMK1P53667 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.4□□□□□ -2.03
LIMK1P53667 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.4□□□□□ -2.03
LIMK1P53667 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.4□□□□□ -2.03
LIMK1P53667 AC116337.1-201ENST00000509680 687 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 SNORA14.1-201ENST00000516113 141 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 RNU6-323P-201ENST00000521915 107 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 MTND1P35-201ENST00000526739 508 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 AC090115.3-201ENST00000553218 849 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 ZNF519P2-201ENST00000557032 169 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.4□□□□□ -2.03
LIMK1P53667 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.4□□□□□ -2.03
LIMK1P53667 AP000942.3-201ENST00000603702 160 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 AL357078.3-201ENST00000607528 618 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.4□□□□□ -2.03
LIMK1P53667 MIR1321-201ENST00000637766 79 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 AC068137.4-201ENST00000638485 296 ntBASIC2.4□□□□□ -2.03
LIMK1P53667 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LIMK1P53667 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LIMK1P53667 OR4G1P-203ENST00000641984 1631 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 RNU6-105P-201ENST00000363909 104 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 RNU4-12P-201ENST00000365233 139 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 Y_RNA.373-201ENST00000365600 103 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 Y_RNA.402-201ENST00000383972 102 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 RNU2-23P-201ENST00000410545 195 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.39□□□□□ -2.03
LIMK1P53667 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.39□□□□□ -2.03
LIMK1P53667 USP9YP20-201ENST00000419224 558 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 GPM6BP3-201ENST00000442797 145 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 RNU7-138P-201ENST00000459479 64 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 AC087884.1-201ENST00000469738 328 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 AC117503.1-201ENST00000472241 394 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.39□□□□□ -2.03
LIMK1P53667 CBX3P7-201ENST00000532876 502 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.39□□□□□ -2.03
LIMK1P53667 AL157687.1-201ENST00000554853 619 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 AC103996.1-201ENST00000555468 102 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 MIR3126-201ENST00000577443 74 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 AC007229.1-201ENST00000590455 412 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.39□□□□□ -2.03
LIMK1P53667 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LIMK1P53667 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LIMK1P53667 WWP1P1-201ENST00000466609 2769 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.38□□□□□ -2.03
LIMK1P53667 RNU6-1090P-201ENST00000364065 94 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 U8.8-201ENST00000365399 135 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 RNU4-20P-201ENST00000365601 151 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 RNU6-1032P-201ENST00000384100 107 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 Y_RNA.516-201ENST00000384541 124 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.38□□□□□ -2.03
LIMK1P53667 AL161788.1-201ENST00000441805 169 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 Y_RNA.654-201ENST00000497848 106 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.38□□□□□ -2.03
LIMK1P53667 CKS1BP7-201ENST00000522230 235 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 AC021269.2-201ENST00000532318 330 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.38□□□□□ -2.03
LIMK1P53667 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.38□□□□□ -2.03
LIMK1P53667 AC010525.2-201ENST00000590920 195 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.38□□□□□ -2.03
LIMK1P53667 AC092807.2-201ENST00000609367 243 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 AL121757.2-201ENST00000611223 313 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 AC008121.3-201ENST00000618726 433 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
LIMK1P53667 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.38□□□□□ -2.03
LIMK1P53667 FER-210ENST00000628534 558 ntTSL 5 BASIC2.38□□□□□ -2.03
LIMK1P53667 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.38□□□□□ -2.03
LIMK1P53667 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.38□□□□□ -2.03
LIMK1P53667 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LIMK1P53667 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.38□□□□□ -2.03
LIMK1P53667 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIMK1P53667 Y_RNA.38-201ENST00000362617 102 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
LIMK1P53667 Y_RNA.231-201ENST00000364358 102 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms