Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.24□□□□□ -1.57
NUBP1P53384 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.24□□□□□ -1.57
NUBP1P53384 MIR4778-201ENST00000577635 80 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 MIR4715-201ENST00000584117 79 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 AC242852.1-201ENST00000612151 96 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUBP1P53384 AC244015.1-201ENST00000622301 99 ntBASIC5.24□□□□□ -1.57
NUBP1P53384 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUBP1P53384 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.23□□□□□ -1.57
NUBP1P53384 AC004817.4-201ENST00000602396 3625 ntBASIC5.23□□□□□ -1.57
NUBP1P53384 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
NUBP1P53384 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 AL049781.1-201ENST00000623195 3585 ntBASIC5.23□□□□□ -1.57
NUBP1P53384 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NUBP1P53384 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
NUBP1P53384 Y_RNA.96-201ENST00000363092 109 ntBASIC5.23□□□□□ -1.57
NUBP1P53384 AC007738.1-201ENST00000413892 348 ntBASIC5.23□□□□□ -1.57
NUBP1P53384 Z98742.2-201ENST00000431564 187 ntBASIC5.23□□□□□ -1.57
NUBP1P53384 RN7SL41P-201ENST00000476144 297 ntBASIC5.23□□□□□ -1.57
NUBP1P53384 RNU7-123P-201ENST00000515911 60 ntBASIC5.23□□□□□ -1.57
NUBP1P53384 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NUBP1P53384 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.23□□□□□ -1.57
NUBP1P53384 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NUBP1P53384 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
NUBP1P53384 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUBP1P53384 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NUBP1P53384 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUBP1P53384 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NUBP1P53384 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUBP1P53384 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUBP1P53384 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.22□□□□□ -1.57
NUBP1P53384 RNU1-59P-201ENST00000364829 162 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 RN7SKP202-201ENST00000410439 330 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 RPS29P10-201ENST00000439197 166 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 SNRPGP5-201ENST00000456003 220 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 RNU7-6P-201ENST00000516845 62 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 IGLVIV-65-201ENST00000517313 360 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 MIR4305-201ENST00000583252 102 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 U7.3-201ENST00000616123 62 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.22□□□□□ -1.57
NUBP1P53384 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NUBP1P53384 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NUBP1P53384 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUBP1P53384 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NUBP1P53384 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUBP1P53384 FAM35CP-201ENST00000554755 2470 ntBASIC5.22□□□□□ -1.57
NUBP1P53384 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.22□□□□□ -1.57
NUBP1P53384 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NUBP1P53384 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.22□□□□□ -1.57
NUBP1P53384 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NUBP1P53384 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NUBP1P53384 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.22□□□□□ -1.57
NUBP1P53384 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NUBP1P53384 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NUBP1P53384 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NUBP1P53384 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NUBP1P53384 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUBP1P53384 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUBP1P53384 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
NUBP1P53384 RNU1-20P-201ENST00000363314 162 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 RNU6-1104P-201ENST00000384723 104 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 AL451046.2-201ENST00000403074 277 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 AC096949.1-201ENST00000412047 152 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 DBIP2-201ENST00000419076 262 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 RPS15AP28-201ENST00000435088 386 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.21□□□□□ -1.58
NUBP1P53384 RN7SL319P-201ENST00000480656 221 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 RNA5SP464-201ENST00000516251 108 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 AC103810.1-201ENST00000579873 453 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 ZNF271P-202ENST00000465539 1970 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUBP1P53384 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUBP1P53384 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUBP1P53384 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NUBP1P53384 AP002512.4-202ENST00000641599 4530 ntBASIC5.21□□□□□ -1.58
NUBP1P53384 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NUBP1P53384 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NUBP1P53384 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NUBP1P53384 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.21□□□□□ -1.58
NUBP1P53384 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUBP1P53384 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUBP1P53384 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NUBP1P53384 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUBP1P53384 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUBP1P53384 Y_RNA.73-201ENST00000362910 113 ntBASIC5.2□□□□□ -1.58
NUBP1P53384 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NUBP1P53384 RNU6-938P-201ENST00000411285 103 ntBASIC5.2□□□□□ -1.58
NUBP1P53384 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.2□□□□□ -1.58
NUBP1P53384 HMGN2P27-201ENST00000427352 270 ntBASIC5.2□□□□□ -1.58
NUBP1P53384 AC019288.1-201ENST00000557918 224 ntBASIC5.2□□□□□ -1.58
NUBP1P53384 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
NUBP1P53384 AC239868.2-201ENST00000564237 4527 ntBASIC5.2□□□□□ -1.58
NUBP1P53384 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUBP1P53384 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms