Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
NEK3P51956 MIR521-1-201ENST00000384902 87 ntBASIC2.99□□□□□ -1.93
NEK3P51956 MIR517A-201ENST00000385001 87 ntBASIC2.99□□□□□ -1.93
NEK3P51956 MIR561-201ENST00000385216 97 ntBASIC2.99□□□□□ -1.93
NEK3P51956 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NEK3P51956 MIR548K-201ENST00000408406 116 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AC074085.1-201ENST00000413598 418 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AL590135.1-201ENST00000422215 156 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AC019205.3-201ENST00000424573 156 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.99□□□□□ -1.93
NEK3P51956 USP9YP8-201ENST00000441913 500 ntBASIC2.99□□□□□ -1.93
NEK3P51956 GPM6BP3-201ENST00000442797 145 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.99□□□□□ -1.93
NEK3P51956 AC016700.2-201ENST00000446011 156 ntBASIC2.99□□□□□ -1.93
NEK3P51956 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.99□□□□□ -1.93
NEK3P51956 AL049873.1-201ENST00000480540 376 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AC015911.1-201ENST00000495111 156 ntBASIC2.99□□□□□ -1.93
NEK3P51956 PTP4A1P4-201ENST00000512479 322 ntBASIC2.99□□□□□ -1.93
NEK3P51956 SCARNA13-201ENST00000516672 275 ntBASIC2.99□□□□□ -1.93
NEK3P51956 RNU7-30P-201ENST00000516835 62 ntBASIC2.99□□□□□ -1.93
NEK3P51956 RNU6-273P-201ENST00000516937 96 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.99□□□□□ -1.93
NEK3P51956 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NEK3P51956 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.99□□□□□ -1.93
NEK3P51956 FGF7P1-201ENST00000582820 288 ntBASIC2.99□□□□□ -1.93
NEK3P51956 POLR3GP2-201ENST00000588366 668 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AL355297.2-201ENST00000604792 129 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AC107871.2-201ENST00000612894 502 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
NEK3P51956 AC108206.1-201ENST00000570186 4159 ntBASIC2.99□□□□□ -1.93
NEK3P51956 AC009487.2-201ENST00000420969 6821 ntBASIC2.99□□□□□ -1.93
NEK3P51956 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NEK3P51956 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
NEK3P51956 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.98□□□□□ -1.93
NEK3P51956 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NEK3P51956 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NEK3P51956 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NEK3P51956 RPL19P1-201ENST00000411635 428 ntBASIC2.98□□□□□ -1.93
NEK3P51956 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.98□□□□□ -1.93
NEK3P51956 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.98□□□□□ -1.93
NEK3P51956 AL139132.1-201ENST00000431587 344 ntBASIC2.98□□□□□ -1.93
NEK3P51956 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.98□□□□□ -1.93
NEK3P51956 AC107399.1-201ENST00000451226 265 ntBASIC2.98□□□□□ -1.93
NEK3P51956 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.98□□□□□ -1.93
NEK3P51956 RNU7-26P-201ENST00000458980 63 ntBASIC2.98□□□□□ -1.93
NEK3P51956 AP001486.1-201ENST00000463339 476 ntBASIC2.98□□□□□ -1.93
NEK3P51956 RPS29P26-201ENST00000477483 171 ntBASIC2.98□□□□□ -1.93
NEK3P51956 AC090525.1-201ENST00000479116 478 ntBASIC2.98□□□□□ -1.93
NEK3P51956 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.98□□□□□ -1.93
NEK3P51956 MTND5P5-201ENST00000503764 376 ntBASIC2.98□□□□□ -1.93
NEK3P51956 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.98□□□□□ -1.93
NEK3P51956 SCGB1D5P-201ENST00000515134 247 ntBASIC2.98□□□□□ -1.93
NEK3P51956 Y_RNA.682-201ENST00000516457 100 ntBASIC2.98□□□□□ -1.93
NEK3P51956 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.98□□□□□ -1.93
NEK3P51956 AC018630.3-201ENST00000542637 96 ntBASIC2.98□□□□□ -1.93
NEK3P51956 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.98□□□□□ -1.93
NEK3P51956 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NEK3P51956 SNORA43.4-201ENST00000629559 138 ntBASIC2.98□□□□□ -1.93
NEK3P51956 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.98□□□□□ -1.93
NEK3P51956 AL365361.1-201ENST00000566942 3481 ntBASIC2.98□□□□□ -1.93
NEK3P51956 Z82209.1-201ENST00000422141 2135 ntBASIC2.98□□□□□ -1.93
NEK3P51956 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NEK3P51956 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NEK3P51956 SNORA9.2-201ENST00000365361 133 ntBASIC2.97□□□□□ -1.93
NEK3P51956 Y_RNA.390-201ENST00000383932 102 ntBASIC2.97□□□□□ -1.93
NEK3P51956 Y_RNA.504-201ENST00000384481 104 ntBASIC2.97□□□□□ -1.93
NEK3P51956 RNU6-851P-201ENST00000384565 107 ntBASIC2.97□□□□□ -1.93
NEK3P51956 RNU6-1072P-201ENST00000384703 107 ntBASIC2.97□□□□□ -1.93
NEK3P51956 RNU6-443P-201ENST00000384780 107 ntBASIC2.97□□□□□ -1.93
NEK3P51956 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NEK3P51956 SNORA26.7-201ENST00000391288 122 ntBASIC2.97□□□□□ -1.93
NEK3P51956 EIF4EP2-201ENST00000422816 654 ntBASIC2.97□□□□□ -1.93
NEK3P51956 CBX3P6-201ENST00000430257 527 ntBASIC2.97□□□□□ -1.93
NEK3P51956 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.97□□□□□ -1.93
NEK3P51956 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.97□□□□□ -1.93
NEK3P51956 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.97□□□□□ -1.93
NEK3P51956 AL353752.1-201ENST00000454946 260 ntBASIC2.97□□□□□ -1.93
NEK3P51956 AC090096.1-201ENST00000489168 390 ntBASIC2.97□□□□□ -1.93
NEK3P51956 AC116337.1-201ENST00000509680 687 ntBASIC2.97□□□□□ -1.93
NEK3P51956 Y_RNA.691-201ENST00000516611 103 ntBASIC2.97□□□□□ -1.93
NEK3P51956 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.97□□□□□ -1.93
NEK3P51956 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NEK3P51956 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.97□□□□□ -1.93
NEK3P51956 MIR3923-201ENST00000579521 83 ntBASIC2.97□□□□□ -1.93
NEK3P51956 MIR7106-201ENST00000612419 65 ntBASIC2.97□□□□□ -1.93
NEK3P51956 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.97□□□□□ -1.93
NEK3P51956 AC090517.3-201ENST00000625170 141 ntBASIC2.97□□□□□ -1.93
NEK3P51956 SCARNA15.3-201ENST00000626315 122 ntBASIC2.97□□□□□ -1.93
NEK3P51956 SCARNA4.1-201ENST00000628597 123 ntBASIC2.97□□□□□ -1.93
NEK3P51956 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.97□□□□□ -1.93
NEK3P51956 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
NEK3P51956 SNORA80A-201ENST00000363922 136 ntBASIC2.96□□□□□ -1.94
NEK3P51956 RNU6-1286P-201ENST00000383871 107 ntBASIC2.96□□□□□ -1.94
NEK3P51956 AL591034.2-201ENST00000402839 359 ntBASIC2.96□□□□□ -1.94
NEK3P51956 HMGB3P2-201ENST00000411913 584 ntBASIC2.96□□□□□ -1.94
NEK3P51956 AC025750.2-201ENST00000442609 450 ntBASIC2.96□□□□□ -1.94
NEK3P51956 RPL39P40-201ENST00000445481 146 ntBASIC2.96□□□□□ -1.94
NEK3P51956 GSTA11P-201ENST00000452866 669 ntBASIC2.96□□□□□ -1.94
NEK3P51956 RPS27P27-201ENST00000498779 255 ntBASIC2.96□□□□□ -1.94
NEK3P51956 CYP4A27P-201ENST00000567218 190 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms