Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.83□□□□□ -2.54
VCANP13611 RNU6-269P-201ENST00000391077 97 ntBASIC-0.83□□□□□ -2.54
VCANP13611 AL449283.1-202ENST00000418249 604 ntBASIC-0.83□□□□□ -2.54
VCANP13611 NCOR1P3-201ENST00000420479 303 ntBASIC-0.83□□□□□ -2.54
VCANP13611 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.83□□□□□ -2.54
VCANP13611 AC117525.1-201ENST00000515228 503 ntBASIC-0.83□□□□□ -2.54
VCANP13611 SNORA31.6-201ENST00000516241 130 ntBASIC-0.83□□□□□ -2.54
VCANP13611 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.83□□□□□ -2.54
VCANP13611 RNU6-1263P-201ENST00000384601 106 ntBASIC-0.83□□□□□ -2.54
VCANP13611 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.83□□□□□ -2.54
VCANP13611 MTND1P17-201ENST00000448961 204 ntBASIC-0.83□□□□□ -2.54
VCANP13611 AL049870.4-201ENST00000555741 486 ntBASIC-0.83□□□□□ -2.54
VCANP13611 AC025627.3-201ENST00000582078 182 ntBASIC-0.83□□□□□ -2.54
VCANP13611 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.83□□□□□ -2.54
VCANP13611 uc_338.15-201ENST00000615470 191 ntBASIC-0.83□□□□□ -2.54
VCANP13611 uc_338.19-201ENST00000616808 99 ntBASIC-0.83□□□□□ -2.54
VCANP13611 MIR101-2-201ENST00000362195 79 ntBASIC-0.84□□□□□ -2.54
VCANP13611 MTCO2P31-201ENST00000402702 684 ntBASIC-0.84□□□□□ -2.54
VCANP13611 SSR1P2-201ENST00000415208 787 ntBASIC-0.84□□□□□ -2.54
VCANP13611 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
VCANP13611 AC233702.2-202ENST00000562547 291 ntBASIC-0.84□□□□□ -2.54
VCANP13611 AC013476.2-201ENST00000614456 459 ntBASIC-0.84□□□□□ -2.54
VCANP13611 MTND4LP21-201ENST00000415303 295 ntBASIC-0.84□□□□□ -2.54
VCANP13611 AC245102.2-201ENST00000448956 180 ntBASIC-0.84□□□□□ -2.54
VCANP13611 RNU7-165P-201ENST00000458864 60 ntBASIC-0.84□□□□□ -2.54
VCANP13611 RNU7-23P-201ENST00000459465 62 ntBASIC-0.84□□□□□ -2.54
VCANP13611 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.84□□□□□ -2.54
VCANP13611 RNU6-910P-201ENST00000390844 107 ntBASIC-0.85□□□□□ -2.54
VCANP13611 U3.29-201ENST00000391296 212 ntBASIC-0.85□□□□□ -2.54
VCANP13611 SNORA3B-201ENST00000391305 131 ntBASIC-0.85□□□□□ -2.54
VCANP13611 MIR892B-201ENST00000401279 77 ntBASIC-0.85□□□□□ -2.54
VCANP13611 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.85□□□□□ -2.54
VCANP13611 AL139396.1-201ENST00000421137 167 ntBASIC-0.85□□□□□ -2.54
VCANP13611 AL035398.1-201ENST00000430869 322 ntBASIC-0.85□□□□□ -2.54
VCANP13611 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.85□□□□□ -2.54
VCANP13611 AL512310.8-201ENST00000550183 120 ntBASIC-0.85□□□□□ -2.54
VCANP13611 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.85□□□□□ -2.54
VCANP13611 AC012669.1-201ENST00000603209 283 ntBASIC-0.85□□□□□ -2.54
VCANP13611 AC011451.2-201ENST00000604303 598 ntBASIC-0.85□□□□□ -2.54
VCANP13611 AC009237.15-201ENST00000610252 501 ntBASIC-0.85□□□□□ -2.54
VCANP13611 SNORA26.3-201ENST00000391119 136 ntBASIC-0.85□□□□□ -2.55
VCANP13611 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.85□□□□□ -2.55
VCANP13611 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.85□□□□□ -2.55
VCANP13611 RPS26P48-201ENST00000491713 339 ntBASIC-0.85□□□□□ -2.55
VCANP13611 RNU5F-8P-201ENST00000515941 111 ntBASIC-0.85□□□□□ -2.55
VCANP13611 AC138207.3-201ENST00000585289 166 ntBASIC-0.85□□□□□ -2.55
VCANP13611 RNU6-884P-201ENST00000363889 107 ntBASIC-0.85□□□□□ -2.55
VCANP13611 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.85□□□□□ -2.55
VCANP13611 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.85□□□□□ -2.55
VCANP13611 AC092427.1-201ENST00000439177 601 ntBASIC-0.85□□□□□ -2.55
VCANP13611 RPL31P20-201ENST00000449593 360 ntBASIC-0.85□□□□□ -2.55
VCANP13611 RPL7P55-201ENST00000450522 746 ntBASIC-0.85□□□□□ -2.55
VCANP13611 RPL31P53-201ENST00000457065 348 ntBASIC-0.85□□□□□ -2.55
VCANP13611 MIR548AD-201ENST00000584780 82 ntBASIC-0.85□□□□□ -2.55
VCANP13611 AL162726.3-218ENST00000636401 95 ntBASIC-0.85□□□□□ -2.55
VCANP13611 AL591034.2-201ENST00000402839 359 ntBASIC-0.86□□□□□ -2.55
VCANP13611 AL590002.1-201ENST00000406554 418 ntBASIC-0.86□□□□□ -2.55
VCANP13611 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.86□□□□□ -2.55
VCANP13611 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.86□□□□□ -2.55
VCANP13611 AC008628.1-201ENST00000508663 265 ntBASIC-0.86□□□□□ -2.55
VCANP13611 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
VCANP13611 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC-0.86□□□□□ -2.55
VCANP13611 AL133396.1-201ENST00000432048 687 ntBASIC-0.86□□□□□ -2.55
VCANP13611 AC087499.4-201ENST00000448505 178 ntBASIC-0.86□□□□□ -2.55
VCANP13611 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.86□□□□□ -2.55
VCANP13611 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.86□□□□□ -2.55
VCANP13611 RNU6-25P-201ENST00000383873 107 ntBASIC-0.87□□□□□ -2.55
VCANP13611 RNU6-793P-201ENST00000384233 104 ntBASIC-0.87□□□□□ -2.55
VCANP13611 RNU6-29P-201ENST00000384637 107 ntBASIC-0.87□□□□□ -2.55
VCANP13611 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.87□□□□□ -2.55
VCANP13611 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.87□□□□□ -2.55
VCANP13611 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.87□□□□□ -2.55
VCANP13611 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC-0.87□□□□□ -2.55
VCANP13611 RNU6-27P-201ENST00000516146 107 ntBASIC-0.87□□□□□ -2.55
VCANP13611 AP003168.1-201ENST00000530091 307 ntBASIC-0.87□□□□□ -2.55
VCANP13611 AC068792.1-201ENST00000621354 417 ntBASIC-0.87□□□□□ -2.55
VCANP13611 MIR124-2-201ENST00000385081 109 ntBASIC-0.87□□□□□ -2.55
VCANP13611 RNU4-46P-201ENST00000410818 138 ntBASIC-0.87□□□□□ -2.55
VCANP13611 AP003973.1-201ENST00000604639 691 ntBASIC-0.87□□□□□ -2.55
VCANP13611 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.87□□□□□ -2.55
VCANP13611 RNU4-36P-201ENST00000364294 144 ntBASIC-0.87□□□□□ -2.55
VCANP13611 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.87□□□□□ -2.55
VCANP13611 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.87□□□□□ -2.55
VCANP13611 SNORA25.12-201ENST00000516202 82 ntBASIC-0.87□□□□□ -2.55
VCANP13611 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC-0.88□□□□□ -2.55
VCANP13611 MTND4P15-201ENST00000437913 1033 ntBASIC-0.88□□□□□ -2.55
VCANP13611 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.88□□□□□ -2.55
VCANP13611 AC125611.1-201ENST00000549563 229 ntBASIC-0.88□□□□□ -2.55
VCANP13611 TMF1P1-201ENST00000576058 373 ntBASIC-0.88□□□□□ -2.55
VCANP13611 MIR4770-201ENST00000579149 58 ntBASIC-0.88□□□□□ -2.55
VCANP13611 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.88□□□□□ -2.55
VCANP13611 MIR29B2-201ENST00000385055 81 ntBASIC-0.88□□□□□ -2.55
VCANP13611 MIR514A1-201ENST00000385133 98 ntBASIC-0.88□□□□□ -2.55
VCANP13611 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
VCANP13611 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.88□□□□□ -2.55
VCANP13611 AP001330.4-201ENST00000604350 154 ntBASIC-0.88□□□□□ -2.55
VCANP13611 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.88□□□□□ -2.55
VCANP13611 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.88□□□□□ -2.55
VCANP13611 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.88□□□□□ -2.55
VCANP13611 RNA5SP482-201ENST00000391269 118 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms