Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
HCN1O60741 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
HCN1O60741 Y_RNA.194-201ENST00000363985 102 ntBASIC1.84□□□□□ -2.11
HCN1O60741 RNU4-24P-201ENST00000364565 139 ntBASIC1.84□□□□□ -2.11
HCN1O60741 RNU6-996P-201ENST00000365438 107 ntBASIC1.84□□□□□ -2.11
HCN1O60741 SNORA25B-201ENST00000365507 128 ntBASIC1.84□□□□□ -2.11
HCN1O60741 Y_RNA.559-201ENST00000384686 107 ntBASIC1.84□□□□□ -2.11
HCN1O60741 RNU6-482P-201ENST00000391068 107 ntBASIC1.84□□□□□ -2.11
HCN1O60741 RNU6-1158P-201ENST00000391167 107 ntBASIC1.84□□□□□ -2.11
HCN1O60741 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
HCN1O60741 RNU2-16P-201ENST00000410712 136 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.84□□□□□ -2.11
HCN1O60741 AC073415.1-201ENST00000449240 153 ntBASIC1.84□□□□□ -2.11
HCN1O60741 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.84□□□□□ -2.11
HCN1O60741 RPL23AP3-201ENST00000453844 468 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AL122001.1-201ENST00000457027 370 ntBASIC1.84□□□□□ -2.11
HCN1O60741 MTND2P33-201ENST00000506452 1031 ntBASIC1.84□□□□□ -2.11
HCN1O60741 RNU6-586P-201ENST00000517265 104 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.84□□□□□ -2.11
HCN1O60741 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.84□□□□□ -2.11
HCN1O60741 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.84□□□□□ -2.11
HCN1O60741 AL137161.1-201ENST00000532231 390 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AP003034.1-201ENST00000534621 422 ntBASIC1.84□□□□□ -2.11
HCN1O60741 HIF1AP1-201ENST00000553642 175 ntBASIC1.84□□□□□ -2.11
HCN1O60741 MTCO3P23-201ENST00000561363 289 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AC233702.2-202ENST00000562547 291 ntBASIC1.84□□□□□ -2.11
HCN1O60741 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.84□□□□□ -2.11
HCN1O60741 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.84□□□□□ -2.11
HCN1O60741 AC012507.3-201ENST00000603556 477 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AC002044.1-201ENST00000606707 158 ntBASIC1.84□□□□□ -2.11
HCN1O60741 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
HCN1O60741 AC008121.3-201ENST00000618726 433 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AL159153.1-201ENST00000619688 317 ntBASIC1.84□□□□□ -2.11
HCN1O60741 AC090517.3-201ENST00000625170 141 ntBASIC1.84□□□□□ -2.11
HCN1O60741 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HCN1O60741 MTND4P14-201ENST00000435799 1354 ntBASIC1.84□□□□□ -2.12
HCN1O60741 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
HCN1O60741 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HCN1O60741 RNU6-527P-201ENST00000363425 104 ntBASIC1.83□□□□□ -2.12
HCN1O60741 RNU6-1274P-201ENST00000384557 107 ntBASIC1.83□□□□□ -2.12
HCN1O60741 MIR561-201ENST00000385216 97 ntBASIC1.83□□□□□ -2.12
HCN1O60741 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HCN1O60741 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HCN1O60741 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.83□□□□□ -2.12
HCN1O60741 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.83□□□□□ -2.12
HCN1O60741 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.83□□□□□ -2.12
HCN1O60741 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
HCN1O60741 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.83□□□□□ -2.12
HCN1O60741 AL353752.1-201ENST00000454946 260 ntBASIC1.83□□□□□ -2.12
HCN1O60741 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.83□□□□□ -2.12
HCN1O60741 snoU13.14-201ENST00000459372 104 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AL163973.1-201ENST00000484753 577 ntBASIC1.83□□□□□ -2.12
HCN1O60741 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.83□□□□□ -2.12
HCN1O60741 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
HCN1O60741 SNORA25.17-201ENST00000517184 124 ntBASIC1.83□□□□□ -2.12
HCN1O60741 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HCN1O60741 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.83□□□□□ -2.12
HCN1O60741 AC107953.1-201ENST00000522216 297 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AC023050.3-201ENST00000541142 333 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.83□□□□□ -2.12
HCN1O60741 MIR4299-201ENST00000577899 72 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AC004223.2-201ENST00000590309 544 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AC104073.3-201ENST00000610942 955 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AL354950.2-201ENST00000617939 290 ntBASIC1.83□□□□□ -2.12
HCN1O60741 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.83□□□□□ -2.12
HCN1O60741 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.83□□□□□ -2.12
HCN1O60741 AC241585.2-209ENST00000638217 143 ntBASIC1.83□□□□□ -2.12
HCN1O60741 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
HCN1O60741 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
HCN1O60741 RNU6-1210P-201ENST00000363775 107 ntBASIC1.82□□□□□ -2.12
HCN1O60741 RNU6-105P-201ENST00000363909 104 ntBASIC1.82□□□□□ -2.12
HCN1O60741 Y_RNA.255-201ENST00000364581 97 ntBASIC1.82□□□□□ -2.12
HCN1O60741 Y_RNA.399-201ENST00000383955 105 ntBASIC1.82□□□□□ -2.12
HCN1O60741 Y_RNA.480-201ENST00000384364 102 ntBASIC1.82□□□□□ -2.12
HCN1O60741 MIR764-201ENST00000390811 85 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AL356432.1-201ENST00000405809 419 ntBASIC1.82□□□□□ -2.12
HCN1O60741 RNU2-2P-201ENST00000410396 191 ntBASIC1.82□□□□□ -2.12
HCN1O60741 SNORD56-201ENST00000413522 71 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AC096920.1-201ENST00000423991 241 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AC027124.2-201ENST00000428249 105 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AL591043.1-201ENST00000432461 424 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AL606489.2-201ENST00000433886 234 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.82□□□□□ -2.12
HCN1O60741 RPL23AP6-201ENST00000446637 472 ntBASIC1.82□□□□□ -2.12
HCN1O60741 RPL39P29-201ENST00000447779 157 ntBASIC1.82□□□□□ -2.12
HCN1O60741 RNU7-180P-201ENST00000459240 63 ntBASIC1.82□□□□□ -2.12
HCN1O60741 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.82□□□□□ -2.12
HCN1O60741 SNORA40.12-201ENST00000516329 111 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.82□□□□□ -2.12
HCN1O60741 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.82□□□□□ -2.12
HCN1O60741 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.82□□□□□ -2.12
HCN1O60741 AC243960.4-201ENST00000600532 288 ntBASIC1.82□□□□□ -2.12
HCN1O60741 ELOCP5-201ENST00000604924 333 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AP001330.5-201ENST00000607176 411 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AC103591.3-201ENST00000608684 209 ntBASIC1.82□□□□□ -2.12
HCN1O60741 AC009318.2-201ENST00000610917 651 ntBASIC1.82□□□□□ -2.12
HCN1O60741 U2.15-201ENST00000611544 191 ntBASIC1.82□□□□□ -2.12
HCN1O60741 U2.16-201ENST00000613119 191 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms