Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU6-539P-201ENST00000516665 103 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 AC105137.2-201ENST00000569073 466 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
GFRA3O60609 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
GFRA3O60609 AL450326.2-201ENST00000421913 1962 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 AC010889.1-201ENST00000566193 2666 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.54□□□□□ -1.68
GFRA3O60609 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.53□□□□□ -1.68
GFRA3O60609 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.53□□□□□ -1.68
GFRA3O60609 Y_RNA.340-201ENST00000365330 92 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 RNU6-1279P-201ENST00000383917 103 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 Y_RNA.486-201ENST00000384398 107 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 RNY1P4-201ENST00000384595 115 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 RNU6-1104P-201ENST00000384723 104 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 MIR218-2-201ENST00000385006 110 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.53□□□□□ -1.68
GFRA3O60609 AC019205.3-201ENST00000424573 156 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 VDAC1P3-201ENST00000434069 851 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 AL450023.3-201ENST00000440592 271 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 Z75741.1-201ENST00000446793 314 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
GFRA3O60609 RPS29P2-201ENST00000479278 136 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.53□□□□□ -1.68
GFRA3O60609 RPL23AP94-201ENST00000512518 302 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 RNU6-1183P-201ENST00000517054 60 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 SNORA31.23-201ENST00000517219 133 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 SNORA74C-1-201ENST00000580726 201 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 MIR4433B-201ENST00000581329 102 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.53□□□□□ -1.68
GFRA3O60609 AC112198.2-201ENST00000426589 6996 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 AL592182.3-201ENST00000642132 3304 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GFRA3O60609 AC125336.1-201ENST00000508893 2827 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 AL161912.2-201ENST00000565707 3007 ntBASIC4.53□□□□□ -1.68
GFRA3O60609 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GFRA3O60609 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA3O60609 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
GFRA3O60609 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
GFRA3O60609 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA3O60609 RNU6-60P-201ENST00000364792 103 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 MTND4LP19-201ENST00000403051 166 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 RPL21P65-201ENST00000406094 466 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 AL691482.1-201ENST00000453255 87 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 snoU13.3-201ENST00000459441 104 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 AC090525.1-201ENST00000479116 478 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 SCARNA15.2-201ENST00000516409 127 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 RNU6-703P-201ENST00000516946 107 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.52□□□□□ -1.69
GFRA3O60609 AC025281.1-201ENST00000567026 265 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 MIR5685-201ENST00000579080 79 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 AL451007.1-201ENST00000595491 289 ntBASIC4.52□□□□□ -1.69
GFRA3O60609 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
GFRA3O60609 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA3O60609 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA3O60609 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA3O60609 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
GFRA3O60609 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA3O60609 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA3O60609 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.52□□□□□ -1.69
GFRA3O60609 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GFRA3O60609 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GFRA3O60609 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
GFRA3O60609 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA3O60609 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA3O60609 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA3O60609 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA3O60609 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
GFRA3O60609 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
GFRA3O60609 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA3O60609 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 RNA5SP241-201ENST00000391326 114 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 MIR208B-201ENST00000401172 77 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 RPL23AP82-202ENST00000427528 469 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 RPL23AP7-203ENST00000449021 469 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 CENPBD1P1-201ENST00000464061 469 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 HSPE1P5-201ENST00000561489 272 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 MIR7853-201ENST00000584820 132 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 AC008507.4-201ENST00000585464 127 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 FAS-AS1.1-201ENST00000615327 126 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 Pinc.1-201ENST00000616452 154 ntBASIC4.51□□□□□ -1.69
GFRA3O60609 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA3O60609 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
GFRA3O60609 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA3O60609 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA3O60609 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA3O60609 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA3O60609 FAM91A3P-201ENST00000456826 2544 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA3O60609 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.5□□□□□ -1.69
GFRA3O60609 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms