Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 ANXA2P1-201ENST00000505539 926 ntBASIC3.48□□□□□ -1.85
CBX4O00257 RNU6-567P-201ENST00000516746 107 ntBASIC3.48□□□□□ -1.85
CBX4O00257 MIR2355-201ENST00000517199 87 ntBASIC3.48□□□□□ -1.85
CBX4O00257 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CBX4O00257 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.48□□□□□ -1.85
CBX4O00257 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.48□□□□□ -1.85
CBX4O00257 uc_338.14-201ENST00000613162 166 ntBASIC3.48□□□□□ -1.85
CBX4O00257 MIR7112-201ENST00000616126 65 ntBASIC3.48□□□□□ -1.85
CBX4O00257 MIR8057-201ENST00000620957 69 ntBASIC3.48□□□□□ -1.85
CBX4O00257 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CBX4O00257 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CBX4O00257 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CBX4O00257 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.47□□□□□ -1.85
CBX4O00257 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CBX4O00257 AL513302.2-201ENST00000562313 1842 ntBASIC3.47□□□□□ -1.85
CBX4O00257 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CBX4O00257 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CBX4O00257 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.47□□□□□ -1.85
CBX4O00257 RNU6-1010P-201ENST00000362757 107 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNU6-1159P-201ENST00000362933 107 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNU5B-2P-201ENST00000363036 113 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNA5SP139-201ENST00000364340 117 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNU4-56P-201ENST00000364700 142 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNU6-17P-201ENST00000384245 107 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNU6-196P-201ENST00000384315 107 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNU6-18P-201ENST00000384527 107 ntBASIC3.47□□□□□ -1.85
CBX4O00257 MIR1252-201ENST00000408861 65 ntBASIC3.47□□□□□ -1.85
CBX4O00257 RNU6-1140P-201ENST00000410517 106 ntBASIC3.47□□□□□ -1.85
CBX4O00257 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.47□□□□□ -1.85
CBX4O00257 OSTCP8-201ENST00000445117 448 ntBASIC3.47□□□□□ -1.85
CBX4O00257 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.47□□□□□ -1.85
CBX4O00257 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.47□□□□□ -1.85
CBX4O00257 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.47□□□□□ -1.85
CBX4O00257 Y_RNA.715-201ENST00000517082 110 ntBASIC3.47□□□□□ -1.85
CBX4O00257 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.47□□□□□ -1.85
CBX4O00257 AC090617.3-201ENST00000573670 475 ntBASIC3.47□□□□□ -1.85
CBX4O00257 MIR4298-201ENST00000584380 73 ntBASIC3.47□□□□□ -1.85
CBX4O00257 7SK.10-201ENST00000621414 298 ntBASIC3.47□□□□□ -1.85
CBX4O00257 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.47□□□□□ -1.85
CBX4O00257 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CBX4O00257 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CBX4O00257 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CBX4O00257 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CBX4O00257 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.46□□□□□ -1.86
CBX4O00257 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.46□□□□□ -1.86
CBX4O00257 RNU6-799P-201ENST00000363567 107 ntBASIC3.46□□□□□ -1.86
CBX4O00257 RNU6-463P-201ENST00000384340 107 ntBASIC3.46□□□□□ -1.86
CBX4O00257 RNU6-541P-201ENST00000384709 110 ntBASIC3.46□□□□□ -1.86
CBX4O00257 SNORA26.3-201ENST00000391119 136 ntBASIC3.46□□□□□ -1.86
CBX4O00257 UBA52P6-201ENST00000399822 382 ntBASIC3.46□□□□□ -1.86
CBX4O00257 MIR1302-3-201ENST00000408128 138 ntBASIC3.46□□□□□ -1.86
CBX4O00257 RN7SKP111-201ENST00000410349 271 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.46□□□□□ -1.86
CBX4O00257 CYCSP48-201ENST00000417124 323 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AL590135.1-201ENST00000422215 156 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AC019205.3-201ENST00000424573 156 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.46□□□□□ -1.86
CBX4O00257 USP9YP16-201ENST00000430287 407 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AC016700.2-201ENST00000446011 156 ntBASIC3.46□□□□□ -1.86
CBX4O00257 USP9YP23-201ENST00000455085 407 ntBASIC3.46□□□□□ -1.86
CBX4O00257 U8.20-201ENST00000459445 131 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AP001324.2-201ENST00000461163 319 ntBASIC3.46□□□□□ -1.86
CBX4O00257 RPL23AP67-201ENST00000465341 474 ntBASIC3.46□□□□□ -1.86
CBX4O00257 RN7SL807P-201ENST00000470923 297 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AC093663.1-201ENST00000497190 394 ntBASIC3.46□□□□□ -1.86
CBX4O00257 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.46□□□□□ -1.86
CBX4O00257 MTCO2P24-201ENST00000515611 426 ntBASIC3.46□□□□□ -1.86
CBX4O00257 MIR3136-201ENST00000583498 78 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.46□□□□□ -1.86
CBX4O00257 AL390123.1-201ENST00000603216 237 ntBASIC3.46□□□□□ -1.86
CBX4O00257 PRR13P7-201ENST00000605538 430 ntBASIC3.46□□□□□ -1.86
CBX4O00257 YPEL5P2-201ENST00000605553 359 ntBASIC3.46□□□□□ -1.86
CBX4O00257 AL021879.1-201ENST00000611756 288 ntBASIC3.46□□□□□ -1.86
CBX4O00257 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CBX4O00257 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CBX4O00257 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CBX4O00257 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
CBX4O00257 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CBX4O00257 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CBX4O00257 SNORA48.5-201ENST00000391143 135 ntBASIC3.45□□□□□ -1.86
CBX4O00257 AC002075.2-201ENST00000425207 252 ntBASIC3.45□□□□□ -1.86
CBX4O00257 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.45□□□□□ -1.86
CBX4O00257 MTCYBP9-201ENST00000431021 303 ntBASIC3.45□□□□□ -1.86
CBX4O00257 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX4O00257 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX4O00257 MRPS35P2-201ENST00000508242 191 ntBASIC3.45□□□□□ -1.86
CBX4O00257 RNU6-635P-201ENST00000516651 102 ntBASIC3.45□□□□□ -1.86
CBX4O00257 RNU6-1198P-201ENST00000516904 67 ntBASIC3.45□□□□□ -1.86
CBX4O00257 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CBX4O00257 AP002404.1-201ENST00000532005 451 ntBASIC3.45□□□□□ -1.86
CBX4O00257 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX4O00257 MIR4276-201ENST00000584832 70 ntBASIC3.45□□□□□ -1.86
CBX4O00257 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX4O00257 AL162713.1-201ENST00000604480 262 ntBASIC3.45□□□□□ -1.86
CBX4O00257 AL137843.1-201ENST00000605078 385 ntBASIC3.45□□□□□ -1.86
CBX4O00257 AL138963.2-201ENST00000605137 226 ntBASIC3.45□□□□□ -1.86
CBX4O00257 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.45□□□□□ -1.86
CBX4O00257 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CBX4O00257 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CBX4O00257 Z75746.1-201ENST00000440243 2080 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms