Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 SNORA70.2-201ENST00000364506 135 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 RNU1-57P-201ENST00000384491 166 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 RNU6-750P-201ENST00000390946 107 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 PTMAP3-201ENST00000447474 330 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 RNU7-164P-201ENST00000459221 62 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 RN7SL197P-201ENST00000466981 299 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 IGKV1-32-201ENST00000519290 311 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 AC068657.1-201ENST00000520807 306 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 AP001880.2-201ENST00000538233 448 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 MIR5096-201ENST00000583713 70 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 MIR3117-201ENST00000584034 78 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 RNU1-30P-201ENST00000606575 163 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 AC096577.2-201ENST00000611455 153 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 AC012531.4-201ENST00000616509 177 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 MIR6133-201ENST00000617057 108 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 AC073308.1-201ENST00000623696 305 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF223E7ERA6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RNF223E7ERA6 AC083899.1-201ENST00000454465 3819 ntBASIC4.2□□□□□ -1.74
RNF223E7ERA6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF223E7ERA6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF223E7ERA6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 RNU6-170P-201ENST00000362832 104 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 RNU1-22P-201ENST00000363334 158 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 Y_RNA.426-201ENST00000384068 113 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 SNORA5.1-201ENST00000384275 131 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 MIR589-201ENST00000385238 99 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 RPL35AP21-201ENST00000437667 333 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 SNRPGP13-201ENST00000442212 177 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 RNU7-14P-201ENST00000459331 62 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 RNU7-123P-201ENST00000515911 60 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 RNU6-795P-201ENST00000516323 103 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 TRAV8-5-201ENST00000537369 341 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 AC022655.2-201ENST00000577280 318 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 AC112200.1-201ENST00000625015 234 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF223E7ERA6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF223E7ERA6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 AC009487.4-201ENST00000624969 3585 ntBASIC4.19□□□□□ -1.74
RNF223E7ERA6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
RNF223E7ERA6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF223E7ERA6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF223E7ERA6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF223E7ERA6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 AP001029.2-203ENST00000589795 4910 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 RNY1P6-201ENST00000384193 109 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 BX323845.1-201ENST00000432417 179 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 AC016717.1-201ENST00000448918 286 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 RNU6-267P-201ENST00000516714 103 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 AC022523.2-201ENST00000561045 150 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF223E7ERA6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF223E7ERA6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 AP002512.4-202ENST00000641599 4530 ntBASIC4.18□□□□□ -1.74
RNF223E7ERA6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RNF223E7ERA6 AC112198.2-201ENST00000426589 6996 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RNF223E7ERA6 RNU6-219P-201ENST00000364728 107 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 RNA5SP223-201ENST00000365174 120 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 MIR147B-201ENST00000390185 80 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 RPL21P65-201ENST00000406094 466 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 AC023141.4-201ENST00000412031 328 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 HMGN2P21-201ENST00000447764 270 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 AC090602.1-201ENST00000469695 252 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 AC004486.1-201ENST00000546846 233 ntBASIC4.17□□□□□ -1.74
RNF223E7ERA6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms