Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-238P-201ENST00000363313 106 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 Y_RNA.500-201ENST00000384466 111 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 MTCO3P19-201ENST00000415864 321 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AC012306.1-201ENST00000423267 114 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 MTND3P2-201ENST00000438452 342 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AC112492.4-201ENST00000456549 352 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 ANXA2P1-201ENST00000505539 926 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 RNU5F-2P-201ENST00000516066 82 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 SNORA31.6-201ENST00000516241 130 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AC113195.1-201ENST00000579952 141 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AC073410.2-201ENST00000603240 332 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 HMGB1P50-201ENST00000605814 607 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AC012603.1-201ENST00000606424 528 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 RMST_6.1-201ENST00000611980 203 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 AC091903.1-201ENST00000624322 454 ntBASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC163A0A0D9SF12 RNU5B-2P-201ENST00000363036 113 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-708P-201ENST00000384217 107 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-1105P-201ENST00000384774 107 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 MIR487A-201ENST00000385009 80 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 U8.22-201ENST00000459141 133 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AP001486.1-201ENST00000463339 476 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 RPL27AP5-201ENST00000469428 449 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 SCARNA17.1-201ENST00000516211 143 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 SCARNA17.2-201ENST00000516334 143 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AC016256.1-201ENST00000547971 354 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 MIR5571-201ENST00000577998 113 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 MIR5004-201ENST00000579078 107 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 Z98751.3-201ENST00000604447 521 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 SCARNA17.4-201ENST00000614296 143 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AC008121.3-201ENST00000618726 433 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AC137590.2-201ENST00000619709 240 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AL109809.4-201ENST00000603520 2185 ntBASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC163A0A0D9SF12 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 Z75746.1-201ENST00000440243 2080 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 Y_RNA.40-201ENST00000362645 93 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-1010P-201ENST00000362757 107 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-26P-201ENST00000383985 107 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-17P-201ENST00000384245 107 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-18P-201ENST00000384527 107 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AC097463.2-201ENST00000421074 142 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 USP9YP16-201ENST00000430287 407 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 USP9YP23-201ENST00000455085 407 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 U8.20-201ENST00000459445 131 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AP000870.1-201ENST00000472927 406 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 SNORA70.18-201ENST00000516696 98 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AC022616.4-201ENST00000522985 181 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AC010620.2-201ENST00000600135 313 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AL078605.1-201ENST00000603529 500 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 AL450472.1-202ENST00000637286 180 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 MFSD8-233ENST00000641482 4860 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 MFSD8-236ENST00000641509 4050 ntBASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC163A0A0D9SF12 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-879P-201ENST00000364328 108 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 MIR186-201ENST00000384988 86 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 RNU6-1093P-201ENST00000391194 107 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 RN7SKP220-201ENST00000410611 288 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 WARS2P1-201ENST00000429678 537 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 ATP5HP2-201ENST00000433885 485 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 RPL23AP22-201ENST00000437556 453 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AC006028.1-201ENST00000438379 402 ntBASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC163A0A0D9SF12 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms