Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU1-117P-201ENST00000517041 158 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AC069294.1-201ENST00000608397 350 ntBASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDHGA11Q9Y5H2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU4-15P-201ENST00000362613 141 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 RN7SKP103-201ENST00000363848 320 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORD115-30-201ENST00000364117 82 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORD87-201ENST00000364849 89 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA22C-201ENST00000384614 134 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 MIR626-201ENST00000385032 94 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 HSPE1P26-201ENST00000405341 275 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 RPS3P1-201ENST00000456781 192 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 AC025445.1-201ENST00000502728 300 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU2-44P-201ENST00000516795 194 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 AP001781.1-201ENST00000530977 207 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 Y_RNA.802-201ENST00000614892 130 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 MIR6780A-201ENST00000615089 68 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 AC010889.1-201ENST00000566193 2666 ntBASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGA11Q9Y5H2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 Y_RNA.40-201ENST00000362645 93 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORD74.4-201ENST00000364129 80 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA58B-201ENST00000364259 136 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 Y_RNA.243-201ENST00000364481 109 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA18.2-201ENST00000383865 132 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 MIR569-201ENST00000385228 96 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA40-201ENST00000388090 126 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA26.5-201ENST00000391215 123 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 MIR513C-201ENST00000401352 84 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 Y_RNA.629-201ENST00000411368 105 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AIMP1P2-201ENST00000425294 312 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AL772161.1-201ENST00000439130 476 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AC145146.1-201ENST00000496370 254 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AC026241.1-201ENST00000517873 2142 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AC069200.1-201ENST00000609511 323 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AL138880.2-201ENST00000616214 239 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AL138721.1-201ENST00000616756 179 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AP005019.3-201ENST00000620418 560 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 AC010332.2-201ENST00000613083 1904 ntBASIC4.29□□□□□ -1.72
PCDHGA11Q9Y5H2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 AC010300.1-201ENST00000600671 5134 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-655P-201ENST00000362858 107 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-1210P-201ENST00000363775 107 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 SNORA72.4-201ENST00000384174 132 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-198P-201ENST00000384258 104 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 AL355497.1-201ENST00000406262 551 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU6-257P-201ENST00000410238 98 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RNU2-49P-201ENST00000410666 184 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RPL30P13-201ENST00000418873 348 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 SNRPGP5-201ENST00000456003 220 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RPS29P2-201ENST00000479278 136 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 SRIP1-201ENST00000489235 288 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RPL23AP97-201ENST00000568955 471 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 AL365222.1-201ENST00000614661 98 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.28□□□□□ -1.72
PCDHGA11Q9Y5H2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms