Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC096577.2-201ENST00000611455 153 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AL359198.2-201ENST00000611836 194 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 AC012314.7-201ENST00000619693 93 ntBASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS5Q9UPZ3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 RNA5SP119-201ENST00000362715 117 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 SNORD45.3-201ENST00000363836 72 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 RNU6-573P-201ENST00000383938 106 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 RNU6-146P-201ENST00000384602 108 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 SNORA26.3-201ENST00000391119 136 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 HMGB1P37-201ENST00000439613 609 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 RNU6-1183P-201ENST00000517054 60 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 AC093331.1-201ENST00000521474 169 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 TRAV8-5-201ENST00000537369 341 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 LINC00933-203ENST00000559812 219 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 RN7SL600P-201ENST00000581811 299 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 AC011471.1-201ENST00000585766 187 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 AC020895.1-201ENST00000595362 272 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 SNORA51-201ENST00000606420 132 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 AC007546.2-201ENST00000623996 360 ntBASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HPS5Q9UPZ3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AP001273.1-201ENST00000624493 3152 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 RNU1-44P-201ENST00000384453 163 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 EDDM3CP-201ENST00000415977 425 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AL500522.2-201ENST00000448562 343 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AC108022.1-201ENST00000493466 478 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 RNU6-703P-201ENST00000516946 107 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 RNA5SP291-201ENST00000517222 105 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AC018630.3-201ENST00000542637 96 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 MIR3921-201ENST00000577308 85 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AC025166.1-201ENST00000612411 163 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 AL133383.2-201ENST00000622958 2336 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HPS5Q9UPZ3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 RNU6-1107P-201ENST00000364817 104 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 RNU6-756P-201ENST00000383997 107 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 SNORA18.3-201ENST00000384122 132 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 NDUFB4P4-201ENST00000404822 243 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 RNU6-383P-201ENST00000410864 94 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 Y_RNA.622-201ENST00000411091 108 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 SNRPEP9-201ENST00000436794 238 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 AC244670.1-201ENST00000436879 112 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 AC110768.1-201ENST00000509222 400 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 RPL30P11-203ENST00000598995 310 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 AC090132.2-201ENST00000615881 347 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 MAPK10-349ENST00000641767 3661 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 AL592182.3-201ENST00000642132 3304 ntBASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS5Q9UPZ3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms