Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PNMA3Q9UL41 Z82209.1-201ENST00000422141 2135 ntBASIC5.11□□□□□ -1.59
PNMA3Q9UL41 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PNMA3Q9UL41 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 Y_RNA.120-201ENST00000363304 110 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 SNORD45.3-201ENST00000363836 72 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 RNU6-884P-201ENST00000363889 107 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 RNU6-1197P-201ENST00000391183 107 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 EI24P2-201ENST00000397776 1076 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 CBX3P9-201ENST00000402326 552 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 CKS1BP6-201ENST00000424932 240 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 TOMM22P2-201ENST00000430735 237 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 RPL23AP52-201ENST00000439311 478 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 RNA5SP154-201ENST00000516193 111 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 MIR3923-201ENST00000579521 83 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 MIR4429-201ENST00000580105 73 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 MIR4286-201ENST00000580651 93 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 U6.115-201ENST00000636045 103 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 AL672167.1-203ENST00000641299 2975 ntBASIC5.1□□□□□ -1.59
PNMA3Q9UL41 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PNMA3Q9UL41 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
PNMA3Q9UL41 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PNMA3Q9UL41 RNU6-880P-201ENST00000384526 107 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 SNORA79-201ENST00000408376 140 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 RN7SKP202-201ENST00000410439 330 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 Y_RNA.622-201ENST00000411091 108 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 NDUFS5P4-201ENST00000412983 318 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.09□□□□□ -1.59
PNMA3Q9UL41 RN7SL691P-201ENST00000494487 301 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 RPL30P5-201ENST00000494923 336 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 RNU6-581P-201ENST00000516214 105 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 RNU2-60P-201ENST00000517290 128 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 AC093331.1-201ENST00000521474 169 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.09□□□□□ -1.59
PNMA3Q9UL41 AC015813.4-201ENST00000610469 179 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 MIR6891-201ENST00000618788 93 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 AL121890.5-201ENST00000620848 304 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PNMA3Q9UL41 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.09□□□□□ -1.59
PNMA3Q9UL41 AP001273.1-201ENST00000624493 3152 ntBASIC5.09□□□□□ -1.59
PNMA3Q9UL41 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PNMA3Q9UL41 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PNMA3Q9UL41 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PNMA3Q9UL41 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 DHX9P1-201ENST00000436565 3076 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 MIR554-201ENST00000384874 96 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 AC009237.10-201ENST00000414112 510 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 AL117339.2-201ENST00000430475 180 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 AC006028.1-201ENST00000438379 402 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 RN7SL604P-201ENST00000492589 296 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 AIG1P1-201ENST00000503376 148 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 AC025754.2-201ENST00000606491 432 ntBASIC5.08□□□□□ -1.6
PNMA3Q9UL41 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PNMA3Q9UL41 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AC002543.1-201ENST00000299783 1954 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 MIR372-201ENST00000362225 67 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 RNA5SP513-201ENST00000364648 118 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 RNA5SP283-201ENST00000365604 119 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 RNU6-1336P-201ENST00000383886 109 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AL356095.1-201ENST00000417217 199 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 MLLT10P1-201ENST00000418346 262 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AL356535.1-201ENST00000440335 398 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 SNRPGP8-201ENST00000454064 226 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AL592156.1-201ENST00000508758 304 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 RN7SKP46-201ENST00000515942 234 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 SNORA70.12-201ENST00000516084 153 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 RNA5SP49-201ENST00000516450 115 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 AC099778.2-201ENST00000610904 211 ntBASIC5.07□□□□□ -1.6
PNMA3Q9UL41 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PNMA3Q9UL41 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms