Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RNU6-1141P-201ENST00000364520 107 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 SNORA36A-201ENST00000384221 132 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.489-201ENST00000384410 101 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 U3.39-201ENST00000408569 239 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RNU6-121P-201ENST00000410525 99 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RNU2-49P-201ENST00000410666 184 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RNA5SP38-201ENST00000410750 119 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RNU2-38P-201ENST00000410856 79 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RPL21P38-201ENST00000418090 167 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 HMGN2P31-201ENST00000432430 273 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AL714022.1-201ENST00000439897 151 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RPL39P29-201ENST00000447779 157 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 SSXP4-201ENST00000451349 245 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 SNORD105B-201ENST00000458770 79 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 SNORD127-201ENST00000458892 86 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AP000870.1-201ENST00000472927 406 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC098869.1-201ENST00000481627 292 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC106707.2-201ENST00000484182 374 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC016632.1-201ENST00000503994 196 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 CKS1BP7-201ENST00000522230 235 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AP006245.1-201ENST00000522549 120 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC093023.1-201ENST00000547375 507 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.38□□□□□ -1.87
KCMF1Q9P0J7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AL136164.4-201ENST00000625013 2135 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 HAUS6P2-201ENST00000433254 2404 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 RNU5B-2P-201ENST00000363036 113 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.439-201ENST00000384119 94 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 RNU6-541P-201ENST00000384709 110 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC017079.2-201ENST00000416102 485 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 YME1L1P1-201ENST00000429435 297 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 CYCSP4-201ENST00000429682 331 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 SNORA70.18-201ENST00000516696 98 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC090897.2-201ENST00000581715 130 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC005357.1-201ENST00000588399 301 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC073410.2-201ENST00000603240 332 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AL355877.2-201ENST00000603670 358 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC096772.1-201ENST00000609146 564 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AL359198.2-201ENST00000611836 194 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 AC011476.5-201ENST00000615594 130 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 U6.98-201ENST00000637157 84 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KCMF1Q9P0J7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 RNU6-1301P-201ENST00000362724 104 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 RNU6-879P-201ENST00000364328 108 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 MIR7-3-201ENST00000384898 110 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 MIR487A-201ENST00000385009 80 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 AL133475.1-201ENST00000404414 305 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 RNU6-847P-201ENST00000411115 108 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 AC244670.1-201ENST00000436879 112 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 AL049830.2-201ENST00000480072 201 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 MIR5571-201ENST00000577998 113 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 MIR5047-201ENST00000579212 100 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 MIR3922-201ENST00000585192 84 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 AL138880.2-201ENST00000616214 239 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 CEP170P1-201ENST00000502249 4587 ntBASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
KCMF1Q9P0J7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 RNA5SP119-201ENST00000362715 117 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.143-201ENST00000363520 106 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.350-201ENST00000365409 98 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 RNU6-622P-201ENST00000384272 103 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 RNU6-19P-201ENST00000384718 107 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 SNORD78.2-201ENST00000391076 69 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 RNA5SP252-201ENST00000391131 119 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms