Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC096638.1-201ENST00000444678 216 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AL732372.2-207ENST00000445840 183 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 SEPT14P2-201ENST00000453405 183 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 snoU13.14-201ENST00000459372 104 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 RPL21P99-201ENST00000480369 423 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AF213884.2-201ENST00000510417 903 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 SEPT14P4-201ENST00000513445 186 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 RNU6-1069P-201ENST00000516612 133 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 SNORD60.2-201ENST00000516883 86 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 FO082796.1-201ENST00000523795 183 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 CBX3P7-201ENST00000532876 502 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 AC073410.2-201ENST00000603240 332 ntBASIC2.33□□□□□ -2.04
SNX25Q9H3E2 FER-210ENST00000628534 558 ntTSL 5 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SNX25Q9H3E2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RNU6-522P-201ENST00000364497 107 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RPS29P13-201ENST00000402041 169 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 CYCSP48-201ENST00000417124 323 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 MTCO1P20-201ENST00000425366 358 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AL591043.1-201ENST00000432461 424 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 USP9YP8-201ENST00000441913 500 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AL031659.1-201ENST00000447075 539 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RNU6-1208P-201ENST00000459588 107 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RPL30P12-201ENST00000474666 353 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RPL38P4-201ENST00000502376 214 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RNU2-53P-201ENST00000516257 147 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AC069113.1-201ENST00000517763 267 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AC078814.3-201ENST00000553036 491 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AC092747.3-201ENST00000603769 301 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AL138963.2-201ENST00000605137 226 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RNU6-85P-201ENST00000605989 107 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RNU6-89P-201ENST00000606519 100 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AC092807.2-201ENST00000609367 243 ntBASIC2.32□□□□□ -2.04
SNX25Q9H3E2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNX25Q9H3E2 RNU6-451P-201ENST00000362921 107 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 RNY4P14-201ENST00000363656 96 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 RNY3P3-201ENST00000363816 102 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 Y_RNA.231-201ENST00000364358 102 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 SNORA51.11-201ENST00000384442 131 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 MIR95-201ENST00000385072 81 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.31□□□□□ -2.04
SNX25Q9H3E2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.31□□□□□ -2.04
SNX25Q9H3E2 AL031274.1-201ENST00000450334 232 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 AL121594.1-201ENST00000475906 575 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 Y_RNA.654-201ENST00000497848 106 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 PSMA3P-201ENST00000555485 635 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 AL133241.1-201ENST00000556832 487 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 ZNF519P2-201ENST00000557032 169 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 MIR3945-201ENST00000581853 98 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 AC010525.2-201ENST00000590920 195 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 RPL30P11-203ENST00000598995 310 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 AL449363.1-201ENST00000617815 186 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 OR4G1P-203ENST00000641984 1631 ntBASIC2.31□□□□□ -2.04
SNX25Q9H3E2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.31□□□□□ -2.04
SNX25Q9H3E2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 RNU6-212P-201ENST00000362642 104 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 RNU6-827P-201ENST00000365553 106 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 MIR544A-201ENST00000384855 91 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 RN7SKP32-201ENST00000410167 303 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 RNU6-293P-201ENST00000411259 106 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 USP9YP27-201ENST00000418455 438 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 OOSP1P1-201ENST00000423265 274 ntBASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.3□□□□□ -2.04
SNX25Q9H3E2 AC103996.1-201ENST00000555468 102 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms