Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 RNA5SP65-201ENST00000363166 119 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 RNA5SP493-201ENST00000364115 91 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORA70.3-201ENST00000365075 132 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 RNU6-1039P-201ENST00000383931 107 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 Y_RNA.536-201ENST00000384621 113 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR614-201ENST00000385082 90 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORA35-201ENST00000386104 128 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORA26.7-201ENST00000391288 122 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 GAPDHP53-201ENST00000458397 924 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 TRAJ51-201ENST00000504127 63 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 AC016559.1-201ENST00000511420 199 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORA9.3-201ENST00000516383 129 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 RNU6-1089P-201ENST00000516473 104 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORA70.19-201ENST00000516717 90 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 AC007537.1-201ENST00000539347 327 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR3689C-201ENST00000581239 72 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 AP001120.4-201ENST00000590231 108 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR7848-201ENST00000617402 101 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 AC011455.2-201ENST00000599320 3336 ntBASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC3.33□□□□□ -1.88
KRTAP3-3Q9BYR6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 RNU1-109P-201ENST00000383960 147 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR588-201ENST00000384900 83 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL308P-201ENST00000464971 297 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL228P-201ENST00000470060 303 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL382P-201ENST00000482631 282 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL187P-201ENST00000495587 303 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 AP001803.1-201ENST00000525668 147 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR6509-201ENST00000614603 85 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 AC087894.3-201ENST00000623682 349 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORA16A-202ENST00000628458 135 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 SFTPD-AS1-201ENST00000608229 5001 ntBASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-3Q9BYR6 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RNU1-91P-201ENST00000364746 163 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORA70.5-201ENST00000365519 135 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RNU6-696P-201ENST00000390834 107 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 SNORD100-201ENST00000408573 76 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RNA5SP177-201ENST00000410122 107 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 HMGN2P16-201ENST00000456802 261 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RNU7-24P-201ENST00000458867 62 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 AC026726.1-201ENST00000512859 601 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RNA5SP518-201ENST00000515957 119 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SKP11-201ENST00000517018 287 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL199P-201ENST00000578752 281 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL656P-201ENST00000579044 281 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR548H5-201ENST00000580314 60 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 RN7SL404P-201ENST00000582421 281 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR3199-1-201ENST00000582434 88 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 AC061975.3-201ENST00000583209 244 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR4786-201ENST00000583954 80 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 SNRPCP20-201ENST00000588011 210 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 MIR4251-201ENST00000635819 61 ntBASIC3.31□□□□□ -1.88
KRTAP3-3Q9BYR6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms