Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC080013.6-201ENST00000606185 215 ntBASIC2.24□□□□□ -2.05
RAB3IPQ96QF0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB3IPQ96QF0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.24□□□□□ -2.05
RAB3IPQ96QF0 AL160394.1-201ENST00000624765 724 ntBASIC2.24□□□□□ -2.05
RAB3IPQ96QF0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB3IPQ96QF0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AC131280.1-202ENST00000624067 4211 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 RNU4-15P-201ENST00000362613 141 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 RNU6-611P-201ENST00000384276 104 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 BTF3L4P2-201ENST00000392798 346 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AC145146.1-201ENST00000496370 254 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 SNORA31.16-201ENST00000516773 139 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AL512360.1-201ENST00000555346 234 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 AC018889.1-201ENST00000605372 397 ntBASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB3IPQ96QF0 SNORD32A-201ENST00000364805 84 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 RNU6-780P-201ENST00000391030 104 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 SNORA12-201ENST00000391162 147 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 MIR1262-201ENST00000408276 93 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC025033.1-201ENST00000463883 194 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 RPL21P99-201ENST00000480369 423 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC022447.4-201ENST00000504053 364 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC091874.1-201ENST00000511402 339 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 RPL39P5-202ENST00000512505 151 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 Y_RNA.693-201ENST00000516641 110 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 RNA5SP364-201ENST00000516938 78 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 RNU6-835P-201ENST00000516974 104 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 RNU6-323P-201ENST00000521915 107 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC018630.3-201ENST00000542637 96 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 TRAV32-201ENST00000553993 340 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AL357078.3-201ENST00000607528 618 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AL121757.2-201ENST00000611223 313 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 MIR1248-201ENST00000629190 106 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
RAB3IPQ96QF0 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.05
RAB3IPQ96QF0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 RNA5SP276-201ENST00000362580 94 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 RNU6-859P-201ENST00000362728 107 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 RNU4-24P-201ENST00000364565 139 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 Y_RNA.436-201ENST00000384097 102 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 Y_RNA.517-201ENST00000384551 106 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 MIR27B-201ENST00000385129 97 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 RNU6-1106P-201ENST00000390845 107 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 CBX3P6-201ENST00000430257 527 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 PSPHP1-201ENST00000450062 261 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 MTND3P16-201ENST00000452205 344 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 SNORD109B-201ENST00000458961 67 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 SNORD109A-201ENST00000459128 67 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 MIR449C-201ENST00000516047 92 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 Y_RNA.704-201ENST00000516851 102 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AP000889.1-201ENST00000530968 660 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC025423.5-201ENST00000550230 219 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC007375.1-201ENST00000554513 578 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC245505.1-201ENST00000556398 224 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC027807.1-201ENST00000559921 996 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 MIR3136-201ENST00000583498 78 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 AC103705.1-201ENST00000619013 241 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 MIR6766-201ENST00000622641 72 ntBASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
RAB3IPQ96QF0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RAB3IPQ96QF0 RNU6-82P-201ENST00000363970 107 ntBASIC2.2□□□□□ -2.06
RAB3IPQ96QF0 Y_RNA.372-201ENST00000365599 102 ntBASIC2.2□□□□□ -2.06
RAB3IPQ96QF0 RNU6-142P-201ENST00000384019 107 ntBASIC2.2□□□□□ -2.06
RAB3IPQ96QF0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.2□□□□□ -2.06
RAB3IPQ96QF0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RAB3IPQ96QF0 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms