Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC245054.2-201ENST00000415639 319 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 RPS15AP10-201ENST00000432472 382 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AL645568.3-201ENST00000433683 316 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 MTND1P17-201ENST00000448961 204 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AC012308.1-201ENST00000451232 178 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AC013470.1-201ENST00000453438 462 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 MED28P2-201ENST00000475771 317 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 MTND3P22-201ENST00000510932 243 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 SCGB1D5P-201ENST00000515134 247 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 RN7SKP24-201ENST00000515888 284 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AC010186.2-204ENST00000537668 439 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX27Q96L92 AL132765.2-201ENST00000610812 351 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX27Q96L92 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AC104985.2-201ENST00000620598 500 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AC244517.12-201ENST00000623581 663 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 AC112487.2-201ENST00000637950 304 ntBASIC3.17□□□□□ -1.9
SNX27Q96L92 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SNX27Q96L92 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX27Q96L92 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX27Q96L92 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX27Q96L92 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX27Q96L92 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX27Q96L92 RNU6-336P-201ENST00000364891 107 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 Y_RNA.339-201ENST00000365325 102 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX27Q96L92 RNU6-851P-201ENST00000384565 107 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX27Q96L92 AL591043.1-201ENST00000432461 424 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 RPS3AP52-201ENST00000435639 297 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 HMGN2P23-201ENST00000456759 269 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 RNU7-187P-201ENST00000458985 68 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 MTND4P17-201ENST00000470444 350 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 RN7SL633P-201ENST00000488974 297 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 FGF7P4-201ENST00000509595 295 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 TRAV32-201ENST00000553993 340 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 MIR8070-201ENST00000616510 88 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 UCA1.1-201ENST00000620952 75 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 AC002064.3-201ENST00000623448 346 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 AC097372.5-201ENST00000623665 376 ntBASIC3.16□□□□□ -1.9
SNX27Q96L92 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.16□□□□□ -1.9
SNX27Q96L92 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX27Q96L92 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SNX27Q96L92 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX27Q96L92 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX27Q96L92 SNORD56.1-201ENST00000362913 68 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 RPL37P10-201ENST00000412884 288 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 POLR2J4-204ENST00000418424 324 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 AC107626.1-201ENST00000471084 183 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 AC018437.1-201ENST00000492214 406 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 GZMAP1-201ENST00000503054 631 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.15□□□□□ -1.91
SNX27Q96L92 RNU5F-8P-201ENST00000515941 111 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX27Q96L92 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX27Q96L92 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX27Q96L92 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX27Q96L92 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX27Q96L92 AL117336.2-201ENST00000602435 335 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 AC009314.1-201ENST00000603871 304 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNX27Q96L92 MIR6128-201ENST00000615528 109 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 AC009233.1-201ENST00000616477 371 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 MIR1302-1-201ENST00000637932 143 ntBASIC3.15□□□□□ -1.91
SNX27Q96L92 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SNX27Q96L92 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX27Q96L92 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SNX27Q96L92 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SNX27Q96L92 RPL9P7-201ENST00000330965 580 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 SNORD62.1-201ENST00000362541 86 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 Y_RNA.151-201ENST00000363566 112 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 RNU6-105P-201ENST00000363909 104 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 SNORA18.3-201ENST00000384122 132 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 MIR592-201ENST00000384959 97 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 MIR147B-201ENST00000390185 80 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 RNU6-293P-201ENST00000411259 106 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 AL030996.1-201ENST00000411430 235 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 AC074117.2-201ENST00000417130 397 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX27Q96L92 AL441985.1-201ENST00000457727 251 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 RPL9P9-202ENST00000466501 579 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.14□□□□□ -1.91
SNX27Q96L92 AC079600.2-201ENST00000550076 130 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.14□□□□□ -1.91
SNX27Q96L92 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX27Q96L92 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX27Q96L92 AL391813.1-201ENST00000603098 260 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 AC069234.5-201ENST00000611056 416 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 MIR3529-201ENST00000637713 78 ntBASIC3.14□□□□□ -1.91
SNX27Q96L92 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNX27Q96L92 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX27Q96L92 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX27Q96L92 RNU4-73P-201ENST00000363164 141 ntBASIC3.13□□□□□ -1.91
SNX27Q96L92 Y_RNA.474-201ENST00000384341 102 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms