Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 Y_RNA.584-201ENST00000391090 114 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 AC027124.2-201ENST00000428249 105 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 AC138761.5-201ENST00000433967 325 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-CQ95604 RPS29P7-201ENST00000439662 171 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 NDUFS5P3-201ENST00000450668 321 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 RN7SL290P-201ENST00000578661 300 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-CQ95604 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-CQ95604 AL513302.2-201ENST00000562313 1842 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 AP001642.1-201ENST00000624727 2117 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-CQ95604 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-CQ95604 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-CQ95604 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-CQ95604 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-CQ95604 SNORA31-201ENST00000362607 130 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 SNORA67.2-201ENST00000384300 149 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 AL592291.1-201ENST00000403830 352 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-CQ95604 AC005300.1-201ENST00000428401 373 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 AC099670.2-201ENST00000435130 321 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 AL133547.1-201ENST00000448546 220 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-CQ95604 RNU6-561P-201ENST00000516222 102 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 TRAV8-5-201ENST00000537369 341 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 TVP23BP1-201ENST00000557500 617 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 MIR3121-201ENST00000579680 77 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 RPS15AP11-201ENST00000594193 385 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 MIR548AY-201ENST00000617669 107 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-CQ95604 BMS1P21-201ENST00000634565 365 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-CQ95604 AC104623.2-202ENST00000623477 4002 ntBASIC4.73□□□□□ -1.65
HLA-CQ95604 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
HLA-CQ95604 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-CQ95604 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-CQ95604 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HLA-CQ95604 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HLA-CQ95604 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HLA-CQ95604 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-CQ95604 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-CQ95604 AL391516.1-201ENST00000554380 2449 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 RNU6-600P-201ENST00000362524 99 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 U1.1-201ENST00000384101 164 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 SNORA9-201ENST00000384215 133 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 RNA5SP129-201ENST00000410276 118 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 RNU1-117P-201ENST00000517041 158 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-CQ95604 MTND5P34-201ENST00000568888 325 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-CQ95604 RN7SL600P-201ENST00000581811 299 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 MIR4472-2-201ENST00000582069 67 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 MIR4298-201ENST00000584380 73 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-CQ95604 AC006254.2-201ENST00000603259 279 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 AC099778.2-201ENST00000610904 211 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 AC073308.1-201ENST00000623696 305 ntBASIC4.72□□□□□ -1.65
HLA-CQ95604 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HLA-CQ95604 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-CQ95604 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-CQ95604 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.71□□□□□ -1.65
HLA-CQ95604 MIR331-201ENST00000362302 94 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 SNORA22-201ENST00000383907 134 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-CQ95604 AC063976.4-201ENST00000421971 163 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 RPS3P1-201ENST00000456781 192 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 RNU7-115P-201ENST00000516433 55 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 RNU6-928P-201ENST00000516876 104 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-CQ95604 MIR378D2-201ENST00000580636 98 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-CQ95604 AC012493.2-201ENST00000595083 291 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 AC140479.6-201ENST00000633535 357 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 AC068647.2-201ENST00000637380 353 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 MIR4679-1-201ENST00000637619 75 ntBASIC4.71□□□□□ -1.66
HLA-CQ95604 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-CQ95604 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-CQ95604 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-CQ95604 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-CQ95604 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-CQ95604 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-CQ95604 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-CQ95604 AC026241.1-201ENST00000517873 2142 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-CQ95604 RNU4-15P-201ENST00000362613 141 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 Y_RNA.280-201ENST00000364765 112 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 RNU6-147P-201ENST00000383983 107 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 RNU6-19P-201ENST00000384718 107 ntBASIC4.7□□□□□ -1.66
HLA-CQ95604 AC245291.1-201ENST00000419501 328 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms