Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
RNFT1Q5M7Z0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 SNORA71.2-201ENST00000364941 134 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 U3.26-201ENST00000391236 204 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 MIR1263-201ENST00000408324 86 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 RNA5SP136-201ENST00000410906 107 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 AC125238.1-201ENST00000448842 249 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 AC021205.2-201ENST00000480069 347 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 AC103975.1-201ENST00000482506 483 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 AC117454.1-201ENST00000491120 168 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 RNA5SP360-201ENST00000516555 118 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 IGKV1-22-201ENST00000524313 326 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 AC099778.2-201ENST00000610904 211 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 AC068205.3-201ENST00000636385 468 ntBASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNFT1Q5M7Z0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 MIR494-201ENST00000349529 81 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-1124P-201ENST00000384169 107 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 MIR208B-201ENST00000401172 77 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AC007738.1-201ENST00000413892 348 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AC005300.1-201ENST00000428401 373 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 Z75741.1-201ENST00000446793 314 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AL021397.1-201ENST00000451806 248 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AC090525.1-201ENST00000479116 478 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 RNU6-1299P-201ENST00000516316 100 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 RNA5SP153-201ENST00000516498 76 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 RNU1-104P-201ENST00000517280 175 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 CYCSP40-201ENST00000575927 294 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AP003357.1-201ENST00000604497 148 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AP005019.3-201ENST00000620418 560 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AC006065.5-201ENST00000623427 349 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 MIR3202-2-201ENST00000635980 79 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 AL136164.3-201ENST00000624429 3978 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 ZNF720P1-201ENST00000562403 1939 ntBASIC4.17□□□□□ -1.74
RNFT1Q5M7Z0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AL513302.2-201ENST00000562313 1842 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AL133243.3-201ENST00000617415 3004 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 RNA5SP509-201ENST00000364577 119 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 Z98745.1-201ENST00000402553 494 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 FTH1P15-201ENST00000406984 280 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AL135786.1-201ENST00000415892 214 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AC104333.2-201ENST00000422630 192 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AL365496.1-201ENST00000426885 215 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 MTATP6P21-201ENST00000440681 189 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 RNU1-103P-201ENST00000516502 125 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 RNU4-60P-201ENST00000517239 135 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AL162713.1-201ENST00000604480 262 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 SNORD115-40-201ENST00000606510 82 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 AL021707.8-201ENST00000609428 183 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 MALAT1.1-201ENST00000618249 95 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 U2.21-201ENST00000637295 81 ntBASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNFT1Q5M7Z0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
RNFT1Q5M7Z0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNFT1Q5M7Z0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNFT1Q5M7Z0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms